Gene detail information of Glyur000025s00003291.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G38470.12.00E-129ACT-like protein tyrosine kinase family protein
NRXP_006589493.10PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Glycine max]
COGYP_001958461.13.00E-37hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH1.00E-77Serine/threonine-protein kinase HT1
trEMBLtr|K7LKX5|K7LKX5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G37071.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000256726679236+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation

GO:0008152  metabolic process


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016597  amino acid binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000025s00003291.1PF01842.20ACT561034.60E-06
Glyur000025s00003291.1PF07714.12Pkinase_Tyr1724184.80E-73


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control10.519
SRR1783600control10.151
SRR1783602moderate drought stress18.194
SRR1811619moderate drought stress18.191

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain14.684
DRR006520Root Summer glycyrrhizin high producing strain14.352
DRR006521Root Winter glycyrrhizin high producing strain29.473
DRR006522Root Winter glycyrrhizin high producing strain29.341
DRR006523Root Summer glycyrrhizin low producing strain17.928
DRR006524Root Summer glycyrrhizin low producing strain18.266
DRR006525Leaf Summer glycyrrhizin high producing strain8.528
DRR006526Leaf Summer glycyrrhizin high producing strain8.555

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.704
SRR2868004Drought Stress(Tissue:root)20.596
SRR2967015Control (Tissue:root)23.445

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave12.841
SRR9715740Leave11.078
SRR9715741Leave15.823
SRR9715739Root2.847
SRR9715742Root8.709
SRR9715743Root8.271

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h21.555
SRR8749028MeJA induced 9h24.406
SRR8749029MeJA induced 9h18.354
SRR8749030Uninduced17.804
SRR8749031Uninduced15.654
SRR8749032Uninduced12.737

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root16.231
SRR8400027Control-Root15.026

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved