Gene detail information of Glyur000025s00003345.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24010.10Protein kinase superfamily protein
NRXP_004496832.10PREDICTED: probable receptor-like protein kinase At5g24010-like, partial [Cicer arietinum]
COGYP_008151634.17.00E-24hypothetical protein SCE1572_26190 [Sorangium cellulosum So0157-2]
Swissprottr|Q9FLW0|Y5241_ARATH0Probable receptor-like protein kinase At5g24010 (Precursor)
trEMBLtr|I1NGX4|I1NGX4_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30170.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00025370082372625-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.3.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000025s00003345.1PF12819.2Malectin_like554156.50E-51
Glyur000025s00003345.1PF07714.12Pkinase_Tyr5177191.60E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control15.899
SRR1783600control15.964
SRR1783602moderate drought stress27.879
SRR1811619moderate drought stress27.590

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.946
DRR006520Root Summer glycyrrhizin high producing strain17.822
DRR006521Root Winter glycyrrhizin high producing strain14.274
DRR006522Root Winter glycyrrhizin high producing strain13.962
DRR006523Root Summer glycyrrhizin low producing strain44.528
DRR006524Root Summer glycyrrhizin low producing strain44.150
DRR006525Leaf Summer glycyrrhizin high producing strain6.005
DRR006526Leaf Summer glycyrrhizin high producing strain5.940

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.316
SRR2868004Drought Stress(Tissue:root)16.340
SRR2967015Control (Tissue:root)18.519

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave9.888
SRR9715740Leave17.194
SRR9715741Leave14.806
SRR9715739Root19.911
SRR9715742Root38.830
SRR9715743Root31.475

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.700
SRR8749028MeJA induced 9h26.625
SRR8749029MeJA induced 9h21.322
SRR8749030Uninduced17.112
SRR8749031Uninduced2.336
SRR8749032Uninduced1.564

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root15.492
SRR8400027Control-Root23.765

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved