Gene detail information of Glyur000025s00003364.3 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G25610.1 | 9.00E-121 | C2H2-like zinc finger protein |
| NR | KHN21764.1 | 0 | hypothetical protein glysoja_027648 [Glycine soja] |
| trEMBL | tr|I1LDP3|I1LDP3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G37780.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 465923 | 471845 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | C2H2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.550 |
| SRR1783600 | control | 16.887 |
| SRR1783602 | moderate drought stress | 14.035 |
| SRR1811619 | moderate drought stress | 13.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 18.985 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.730 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 24.944 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 24.618 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.409 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.067 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.760 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 25.257 |
| SRR2868004 | Drought Stress(Tissue:root) | 29.677 |
| SRR2967015 | Control (Tissue:root) | 23.949 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 11.942 |
| SRR9715740 | Leave | 11.801 |
| SRR9715741 | Leave | 14.768 |
| SRR9715739 | Root | 1.385 |
| SRR9715742 | Root | 16.111 |
| SRR9715743 | Root | 14.708 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.014 |
| SRR8749028 | MeJA induced 9h | 15.894 |
| SRR8749029 | MeJA induced 9h | 13.495 |
| SRR8749030 | Uninduced | 17.718 |
| SRR8749031 | Uninduced | 10.738 |
| SRR8749032 | Uninduced | 9.914 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 24.602 |
| SRR8400027 | Control-Root | 23.828 |