Gene detail information of Glyur000025s00003373.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24020.1 | 0 | NIN like protein 7 |
| NR | KHN12143.1 | 0 | Protein NLP7 [Glycine soja] |
| Swissprot | tr|Q84TH9|NLP7_ARATH | 0 | Protein NLP7 |
| trEMBL | tr|K7N3R8|K7N3R8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G29960.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00025 | 503863 | 508751 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | RWP-RK |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000025s00003373.1 | PF02042.10 | RWP-RK | 586 | 636 | 9.60E-26 |
| Glyur000025s00003373.1 | PF00564.19 | PB1 | 899 | 979 | 1.00E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 24.761 |
| SRR1783600 | control | 24.713 |
| SRR1783602 | moderate drought stress | 22.189 |
| SRR1811619 | moderate drought stress | 21.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.179 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 14.077 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.515 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.277 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.939 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.946 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.416 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.328 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 35.016 |
| SRR2868004 | Drought Stress(Tissue:root) | 36.667 |
| SRR2967015 | Control (Tissue:root) | 38.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 19.589 |
| SRR9715740 | Leave | 28.253 |
| SRR9715741 | Leave | 26.017 |
| SRR9715739 | Root | 3.123 |
| SRR9715742 | Root | 15.160 |
| SRR9715743 | Root | 12.111 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.354 |
| SRR8749028 | MeJA induced 9h | 8.479 |
| SRR8749029 | MeJA induced 9h | 11.078 |
| SRR8749030 | Uninduced | 18.215 |
| SRR8749031 | Uninduced | 31.902 |
| SRR8749032 | Uninduced | 36.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 36.465 |
| SRR8400027 | Control-Root | 29.756 |