Gene detail

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Gene detail information of Glyur000025s00003378.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G52400.1	3.00E-146	cytochrome P450, family 715, subfamily A, polypeptide 1
NR	XP_007143427.1	0	hypothetical protein PHAVU_007G071500g [Phaseolus vulgaris]
COG	YP_007205235.1	2.00E-55	cytochrome P450 [Singulisphaera acidiphila DSM 18658]
Swissprot	tr\|O48786\|C734A_ARATH	7.00E-101	Cytochrome P450 734A1
trEMBL	tr\|V7BFZ7\|V7BFZ7_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW15421.1}

Sequence

Transcript Sequence

>Glyur000025s00003378.1
ATGGAGTTTCTGGGGTTATTTGGGGTTCTCGTTGTGTTGTTGGCAGCATTTTGCCTCTTGTTGCTCTTGACACTAACATTTTGTTGGTGGGTTTTCCCTATCCAAACACATAATAAGCTTAAAAAGTGTGGGTTTGGAGGGCCAACCCCAACGTTTCCACTTGGAAACATAAAAGAGANGAAAAGAAAGAATAGCATTAAATCTTCAGTTGTGTCCCCAAATCCTTCACATGATATTCACTCACACGTTTTCCCCTACTTCTCTTGCTGGCAGAAATCACATGGTAAGGTGTTTGTGTACTGGCTGGGGACGGAGCCATTTTTATACATTGCAGACCCAAAATTCTTGCAGAAAATGTCAACGGAGGTGATGGCAAAGAGATGGGGGAANCCAAGTGTGTTTAGGAATGACAGAGACCCAATGTTTGGGAGTGGCCTCGTCATGGTCGAGGGNAANGATTGGGTGCGNCACCGCCACATTGTTGCCCCCGCATTCAATCCCCTCAACCTCAAGGTCATGGCAAGCAGAATGGTTGAGTCTACGAATCAAATGATAGAGAGGTGGGGAAGCCAAATAAATTGTGGCAACCCCGAAATNGACGTGGAGGGAGAGATTATAGCAACGGCCGGAGAGATTATAGCAAAAACAAGTTTTGGCATGGAAGACNAAAATGCAAGAGAGGTGTTTCACAANTTACGAGCCTTGCAAATGACTCTCTTCAAGACCAATCGCTATGTTGGGGTTCCCTTTGGCAAATACTTCAATGTCAAGAAAACTCTAGAGGCCAAGAAACTTGGGAAAGAAATCGACACGCTCTTGTTGTCCATCATAGAGGCTCGCATGAAGTCACCCAAGAAGAATTCCCAACAAGATTTGTTAGGTTTGTTGCTACAACAAAATCATCAAGTTGATGGCCGATCGGGAAAGACACTAACAAAGAGAGAAGTGGTTGATGAATGCAAGACCTTCTTCTTCGGTGGCCATGAAACTACGGCACTTGCTATCACATGGACTTTGCTACTTCTAGCCATGCACGAAGATTGGCAAAATCAGTTGAGAGATGAGATAAGACAAGTGGTGGGGAACAATGAGCTTGATATCACTATGCTTCCCGGTTTAAAGAAGATGAAGTGTGTGATGAATGAAGTTCTAAGACTATACCCACCAGCACCAAATGTGCAAAGGCAAGCAAGGGAAGACATTCAAGTTGATGATTTAACTGTGCCCAATGGAACCAACTTGTGGATCGATGTGGTAGCGATGCACCATGACCCTGAAATATGGGGAAAGGATGTGAATGAGTTCAGGCCAGAGAGGTTCATGGATGATGTGAACGGTGGATGCAACCACAAGATGGGGTATTTGCCTTTTGGGTTTGGAGGGAGAATGTGTGTCGGTAGAAACTTAACCTTTATGGAGTACAAGATTGTATTAACCTTACTTCTCTCTAGCTTTAGTTTTAAGCTTTCCCCAAGTTACCATCATTCACCATCTATCATGCTCTCCCTAAGGCCCACCCATGGACTTCCACTCATAGTTCAACCCCTTTAG

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00025	554834	558219	-

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP715A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000025s00003378.1	PF00067.17	p450	81	494	1.20E-78

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.625
DRR006520	Root Summer glycyrrhizin high producing strain	0.545
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.142
DRR006524	Root Summer glycyrrhizin low producing strain	0.181
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.743
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.813

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	1.030
SRR2868004	Drought Stress(Tissue:root)	1.788
SRR2967015	Control (Tissue:root)	2.001

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	192.749
SRR9715740	Leave	50.105
SRR9715741	Leave	178.197
SRR9715739	Root	1.869
SRR9715742	Root	8.685
SRR9715743	Root	8.309

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.011
SRR8749028	MeJA induced 9h	0.218
SRR8749029	MeJA induced 9h	0.224
SRR8749030	Uninduced	7.570
SRR8749031	Uninduced	2.259
SRR8749032	Uninduced	6.186

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	2.296
SRR8400027	Control-Root	4.652