Gene detail

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Gene detail information of Glyur000026s00001872.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G11600.1	0	cytochrome P450, family 77, subfamily B, polypeptide 1
NR	XP_004508228.1	0	PREDICTED: uncharacterized protein LOC101501316 [Cicer arietinum]
COG	YP_003270382.1	1.00E-23	cytochrome P450 [Haliangium ochraceum DSM 14365]
Swissprot	tr\|O48928\|C77A3_SOYBN	3.00E-158	Cytochrome P450 77A3
trEMBL	tr\|G7JI12\|G7JI12_MEDTR	0	Cytochrome P450 family 87 protein {ECO:0000313\|EMBL:AES92599.1}

Sequence

Transcript Sequence

>Glyur000026s00001872.1
ATGGAGCCAATGGACTTCGTTCTGGTTTTTCTGGCCCTGGCGNTCATCCGGTGGTGGTGGCGCTACTGGTCCACCACCGGCGGCGGTGCCAAGAACCTTCCGCCGGGGCCGCCGGGGTGGCCAATCGTGGGGAACCTCTTCCAGGTGATCCTCCAACGGCGCCACTTTATCTACGTGGTCCGCGACTTGCGTAAGAAATACGGCCCAATCTTCACGATGCAAATGGGCCAGCGCACGATGATCATCGTGACGAGCGCCGACCTAATCCACGAGGCCCTGGTCCAACGAGGCCCATTGTTCGCGAGTCGGCCCAAGGACTCCCCCATCCGCCTCATCTTCAGCATGGGAAAGTGCGCCATCAACTCCGCCGAGTACGGCCCACTCTGGCGCTCCCTCCGCCGCAACTTCGTCACCGAGATGATCTCCCCGCTTAGGGTAAAGCAGTGCAGCTGGATCCGTAAGTGGGCCATGGAGGCCCACATGTCGAGGATCCAAAACGAGGCCCGCGAAAGGGGATTCGTCGAGGTCATGAGCAACTGCAGGCTCACCATCTGCAGCATCCTCATCTGCCTCTGCTTCGGCGCCAAGATCACCGAGGACAGAATCAGAAGCATCGAGAGCGTCCTCAAGGAGGTCATGCTCATGACGCTCCCCAAGCTCCCGGACTTCCTCCCGGTGCTTACACCGCTTTTCCGGCGGCAGGTGAGGGAGGCGAGGGAGCTGAGGAAGAAGCAGGTGGAGCTTCTGGCGCCGTTGATAAGGAGGAGGAAGGCTTACGTGGACGTCGAGGGGAGGTTGGCTGATCCTGAGATGGCGAGCCCCGTCGGNGCTGCTTACGTGGACTCGCTGTTTGCGTTGGAGGTGCCGGGGAGAGGCCGGTTGGGGGAGGAGGAGTTGGTTACGCTGGTGTCGGAGGTTATCAGCGCCGGGACGGATACGAGCGCCACGGCGGTGGAGTGGGCGCTGCTGCATTTGGTGATGGACCAGGGGATCCAGGAGAGGCTCTACAGGGAGATTGTTGGTTGCGTGGGGAAGAATGGGGTGGTTATGGAGAGTGACGTGGAGAAAATGCCCTACCTCGGTGCCATTGTGAAGGAGACATTCCGGCGACACCCTCCCAGCCACTTCGTGCTCTCTCACGCGGCCACGGCGGAGACGGAGCTGGGTGGGTATACCGTACCCGCGGATGCGAGCGTGGAGTTTTACACGGCGTGGTTGTCGGAGGATCCGGATATGTGGGAGGATCCGGATGAGTTCCGACCCGANAGGTTCTTAAACGGTGGGGATGGGGTTGACGTGGACGTGACGGGGACAAAGGGGGTGAGGATGATGCCATTCGGTGTGGGGAGGAGGATTTGTCCAGCGTGGACGCTGGGAACCTTGCACATTAACATGTTGCTGGCTAAAATGGTGCTCGCTTTCAAGTGGTTGCCCNTTCCCAATGCCCCGCCCGACCCGACTGAGACCTTCGCATTCACCGTTGTCATGAAGAACCCTCTCAAGGCCATTATTCTTCCTAGATCCATTTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00026	115795	117324	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP77B1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function GO:0005506 iron ion binding GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000026s00001872.1	PF00067.17	p450	34	498	1.90E-88

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.374
SRR1783600	control	0.314
SRR1783602	moderate drought stress	0.652
SRR1811619	moderate drought stress	0.615

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.491
DRR006520	Root Summer glycyrrhizin high producing strain	0.492
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.433
DRR006524	Root Summer glycyrrhizin low producing strain	0.506
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.365
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.364

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	3.927
SRR2868004	Drought Stress(Tissue:root)	2.800
SRR2967015	Control (Tissue:root)	3.001

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	4.057
SRR9715740	Leave	0.000
SRR9715741	Leave	0.470
SRR9715739	Root	11.072
SRR9715742	Root	3.772
SRR9715743	Root	3.749

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	40.591
SRR8749028	MeJA induced 9h	25.563
SRR8749029	MeJA induced 9h	25.652
SRR8749030	Uninduced	3.763
SRR8749031	Uninduced	2.954
SRR8749032	Uninduced	13.116

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	1.396
SRR8400027	Control-Root	3.126