Gene detail information of Glyur000026s00001897.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G21960.12.00E-149Peroxidase superfamily protein
NRAHA84196.10cationic peroxidase 2 precursor [Phaseolus vulgaris]
Swissprottr|Q9SB81|PER42_ARATH0Peroxidase 42 (Precursor)
trEMBLtr|V5N881|V5N881_PHAVU0Cationic peroxidase 2 {ECO:0000313|EMBL:AHA84196.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00026249351251656-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00430E1.11.1.7 EC:1.11.1.7 Phenylpropanoid biosynthesis map00940


Gene Ontology

biological_process

GO:0006979  response to oxidative stress

GO:0055114  oxidation-reduction process


molecular_function

GO:0004601  peroxidase activity

GO:0020037  heme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000026s00001897.1PF00141.18peroxidase522952.30E-61


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1055.373
SRR1783600control1055.221
SRR1783602moderate drought stress1669.347
SRR1811619moderate drought stress1664.506

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain553.885
DRR006520Root Summer glycyrrhizin high producing strain546.873
DRR006521Root Winter glycyrrhizin high producing strain73.776
DRR006522Root Winter glycyrrhizin high producing strain72.384
DRR006523Root Summer glycyrrhizin low producing strain467.254
DRR006524Root Summer glycyrrhizin low producing strain468.447
DRR006525Leaf Summer glycyrrhizin high producing strain342.199
DRR006526Leaf Summer glycyrrhizin high producing strain341.699

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)576.687
SRR2868004Drought Stress(Tissue:root)600.840
SRR2967015Control (Tissue:root)898.607

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave161.787
SRR9715740Leave99.189
SRR9715741Leave68.355
SRR9715739Root3612.734
SRR9715742Root987.996
SRR9715743Root1478.936

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h22.393
SRR8749028MeJA induced 9h5.553
SRR8749029MeJA induced 9h7.793
SRR8749030Uninduced0.302
SRR8749031Uninduced0.141
SRR8749032Uninduced0.411

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root757.034
SRR8400027Control-Root1169.474

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved