Gene detail information of Glyur000026s00001909.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G11790.15.00E-118arogenate dehydratase 1
NRXP_003549790.10PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like [Glycine max]
COGYP_004172970.11.00E-71prephenate dehydratase [Anaerolinea thermophila UNI-1]
Swissprottr|Q9SA96|AROD1_ARATH2.00E-153Arogenate dehydratase/prephenate dehydratase 1, chloroplastic (Precursor)
trEMBLtr|I1MR49|I1MR49_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G01610.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00026325276332368+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05359ADT, PDT EC:4.2.1.91 4.2.1.51 Biosynthesis of amino acids map01230
Phenylalanine, tyrosine and tryptophan biosynthesismap00400


Gene Ontology

biological_process

GO:0009094  L-phenylalanine biosynthetic process


molecular_function

GO:0004664  prephenate dehydratase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000026s00001909.1PF00800.13PDT872631.00E-58


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.665
SRR1783600control4.693
SRR1783602moderate drought stress2.988
SRR1811619moderate drought stress3.065

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain3.108
DRR006520Root Summer glycyrrhizin high producing strain3.076
DRR006521Root Winter glycyrrhizin high producing strain0.436
DRR006522Root Winter glycyrrhizin high producing strain0.336
DRR006523Root Summer glycyrrhizin low producing strain1.631
DRR006524Root Summer glycyrrhizin low producing strain1.573
DRR006525Leaf Summer glycyrrhizin high producing strain2.240
DRR006526Leaf Summer glycyrrhizin high producing strain2.119

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.114
SRR2868004Drought Stress(Tissue:root)13.910
SRR2967015Control (Tissue:root)12.660

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.843
SRR9715740Leave1.041
SRR9715741Leave2.074
SRR9715739Root2.795
SRR9715742Root2.861
SRR9715743Root2.121

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h9.333
SRR8749028MeJA induced 9h15.455
SRR8749029MeJA induced 9h15.569
SRR8749030Uninduced68.843
SRR8749031Uninduced128.747
SRR8749032Uninduced50.334

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root14.726
SRR8400027Control-Root15.380

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved