Gene detail information of Glyur000026s00001933.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G26670.15.00E-107Plant haem oxygenase (decyclizing) family protein
NRAFK40999.13.99E-156unknown [Lotus japonicus]
COGYP_007167087.19.00E-08heme oxygenase [Halothece sp. PCC 7418]
Swissprottr|O48782|HMOX1_ARATH3.00E-139Heme oxygenase 1, chloroplastic (Precursor)
trEMBLtr|I3SL57|I3SL57_LOTJA1.00E-156Uncharacterized protein {ECO:0000313|EMBL:AFK40999.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00026436828440648+


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00510HMOX, hmuO, ho EC:1.14.14.18 Porphyrin and chlorophyll metabolism map00860
Mineral absorptionmap04978
Fluid shear stress and atherosclerosismap05418


Gene Ontology

biological_process

GO:0006788  heme oxidation

GO:0055114  oxidation-reduction process


molecular_function

GO:0004392  heme oxygenase (decyclizing) activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000026s00001933.1PF01126.15Heme_oxygenase1092756.20E-14


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control97.292
SRR1783600control97.948
SRR1783602moderate drought stress86.058
SRR1811619moderate drought stress85.381

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain87.562
DRR006520Root Summer glycyrrhizin high producing strain86.629
DRR006521Root Winter glycyrrhizin high producing strain152.028
DRR006522Root Winter glycyrrhizin high producing strain147.574
DRR006523Root Summer glycyrrhizin low producing strain113.152
DRR006524Root Summer glycyrrhizin low producing strain113.928
DRR006525Leaf Summer glycyrrhizin high producing strain108.648
DRR006526Leaf Summer glycyrrhizin high producing strain108.441

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)127.403
SRR2868004Drought Stress(Tissue:root)167.216
SRR2967015Control (Tissue:root)195.234

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave86.692
SRR9715740Leave134.751
SRR9715741Leave85.093
SRR9715739Root88.041
SRR9715742Root85.076
SRR9715743Root82.879

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h67.607
SRR8749028MeJA induced 9h89.367
SRR8749029MeJA induced 9h83.447
SRR8749030Uninduced65.367
SRR8749031Uninduced56.432
SRR8749032Uninduced95.994

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root193.204
SRR8400027Control-Root180.454

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved