Gene detail information of Glyur000026s00001947.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007148443.1 | 9.45E-126 | hypothetical protein PHAVU_006G209200g [Phaseolus vulgaris] |
| trEMBL | tr|V7BR18|V7BR18_PHAVU | 4.00E-126 | Uncharacterized protein {ECO:0000313|EMBL:ESW20437.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00026 | 523379 | 524511 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Ubiquitin Family | RING |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.436 |
| SRR1783600 | control | 5.247 |
| SRR1783602 | moderate drought stress | 5.917 |
| SRR1811619 | moderate drought stress | 5.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 13.857 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.264 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.293 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.924 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.694 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.367 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.660 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 11.981 |
| SRR2868004 | Drought Stress(Tissue:root) | 16.364 |
| SRR2967015 | Control (Tissue:root) | 21.498 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 17.463 |
| SRR9715740 | Leave | 21.369 |
| SRR9715741 | Leave | 24.691 |
| SRR9715739 | Root | 9.568 |
| SRR9715742 | Root | 16.473 |
| SRR9715743 | Root | 16.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.292 |
| SRR8749028 | MeJA induced 9h | 22.888 |
| SRR8749029 | MeJA induced 9h | 26.527 |
| SRR8749030 | Uninduced | 25.554 |
| SRR8749031 | Uninduced | 23.664 |
| SRR8749032 | Uninduced | 24.306 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 11.263 |
| SRR8400027 | Control-Root | 13.326 |