Gene detail information of Glyur000026s00001955.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64530.1 | 1.00E-62 | xylem NAC domain 1 |
| NR | XP_003531559.1 | 1.84E-109 | PREDICTED: NAC transcription factor ONAC010-like [Glycine max] |
| Swissprot | tr|A2YMR0|NAC10_ORYSI | 8.00E-46 | NAC transcription factor ONAC010 |
| trEMBL | tr|I1KUF3|I1KUF3_SOYBN | 7.00E-110 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G19300.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00026 | 552492 | 553491 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NAC |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000026s00001955.1 | PF02365.10 | NAM | 10 | 124 | 2.30E-36 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.492 |
| SRR1783600 | control | 1.401 |
| SRR1783602 | moderate drought stress | 1.772 |
| SRR1811619 | moderate drought stress | 1.804 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.763 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.775 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.581 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.583 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.934 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.026 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 6.061 |
| SRR2868004 | Drought Stress(Tissue:root) | 55.702 |
| SRR2967015 | Control (Tissue:root) | 14.440 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.198 |
| SRR9715740 | Leave | 0.582 |
| SRR9715741 | Leave | 1.764 |
| SRR9715739 | Root | 0.109 |
| SRR9715742 | Root | 1.646 |
| SRR9715743 | Root | 1.678 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.588 |
| SRR8749028 | MeJA induced 9h | 0.804 |
| SRR8749029 | MeJA induced 9h | 0.177 |
| SRR8749030 | Uninduced | 0.714 |
| SRR8749031 | Uninduced | 1.055 |
| SRR8749032 | Uninduced | 1.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.699 |
| SRR8400027 | Control-Root | 2.283 |