Gene detail information of Glyur000026s00001957.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22590.1 | 4.00E-115 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_003547595.1 | 0 | PREDICTED: soyasaponin III rhamnosyltransferase-like [Glycine max] |
| Swissprot | tr|D4Q9Z5|SGT3_SOYBN | 0 | Soyasaponin III rhamnosyltransferase |
| trEMBL | tr|K7M9P8|K7M9P8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G05710.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00026 | 558396 | 562254 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000026s00001957.1 | PF00201.13 | UDPGT | 529 | 722 | 2.60E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 34.635 |
| SRR1783600 | control | 34.526 |
| SRR1783602 | moderate drought stress | 9.646 |
| SRR1811619 | moderate drought stress | 9.478 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.405 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.323 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.291 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.240 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.543 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.492 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.873 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.089 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 51.826 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.670 |
| SRR2967015 | Control (Tissue:root) | 16.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 10.098 |
| SRR9715740 | Leave | 18.330 |
| SRR9715741 | Leave | 11.187 |
| SRR9715739 | Root | 8.381 |
| SRR9715742 | Root | 22.224 |
| SRR9715743 | Root | 20.610 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.128 |
| SRR8749028 | MeJA induced 9h | 0.469 |
| SRR8749029 | MeJA induced 9h | 0.101 |
| SRR8749030 | Uninduced | 0.162 |
| SRR8749031 | Uninduced | 0.034 |
| SRR8749032 | Uninduced | 0.025 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 36.170 |
| SRR8400027 | Control-Root | 22.835 |