Gene detail information of Glyur000026s00001960.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G05010.11.00E-132ethylene-forming enzyme
NRXP_003549632.10PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase-like [Glycine max]
COGYP_003514298.14.00E-272OG-Fe(II) oxygenase [Stackebrandtia nassauensis DSM 44728]
Swissprottr|P31237|ACCO_ACTDE01-aminocyclopropane-1-carboxylate oxidase
trEMBLtr|I1MR21|I1MR21_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G01330.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00026576531578243+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05933E1.14.17.4 EC:1.14.17.4 Cysteine and methionine metabolism map00270


Gene Ontology

biological_process

GO:0055114  oxidation-reduction process


molecular_function

GO:0016491  oxidoreductase activity

GO:0016706  oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000026s00001960.1PF14226.1DIOX_N5961.70E-17
Glyur000026s00001960.1PF03171.152OG-FeII_Oxy1582531.60E-24


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.651
SRR1783600control9.252
SRR1783602moderate drought stress14.926
SRR1811619moderate drought stress14.057

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain8.166
DRR006520Root Summer glycyrrhizin high producing strain9.783
DRR006521Root Winter glycyrrhizin high producing strain1.161
DRR006522Root Winter glycyrrhizin high producing strain1.783
DRR006523Root Summer glycyrrhizin low producing strain23.014
DRR006524Root Summer glycyrrhizin low producing strain24.682
DRR006525Leaf Summer glycyrrhizin high producing strain1.460
DRR006526Leaf Summer glycyrrhizin high producing strain1.276

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.725
SRR2868004Drought Stress(Tissue:root)33.297
SRR2967015Control (Tissue:root)27.399

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.125
SRR9715740Leave0.578
SRR9715741Leave0.153
SRR9715739Root1.216
SRR9715742Root16.453
SRR9715743Root14.753

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.017
SRR8749028MeJA induced 9h0.000
SRR8749029MeJA induced 9h0.000
SRR8749030Uninduced0.000
SRR8749031Uninduced0.000
SRR8749032Uninduced0.120

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.308
SRR8400027Control-Root17.894

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved