Gene detail information of Glyur000027s00001501.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G47670.1 | 1.00E-30 | nuclear factor Y, subunit B6 |
| NR | KHN44907.1 | 6.87E-39 | Nuclear transcription factor Y subunit B-9 [Glycine soja] |
| Swissprot | tr|Q84W66|NFYB6_ARATH | 3.00E-36 | Nuclear transcription factor Y subunit B-6 |
| trEMBL | tr|K7L2H0|K7L2H0_SOYBN | 3.00E-39 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G29695.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00027 | 1679 | 2625 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | NF-YB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000027s00001501.1 | PF00808.18 | CBFD_NFYB_HMF | 49 | 112 | 6.70E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.208 |
| SRR1783600 | control | 0.209 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.132 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 0.025 |
| SRR2868004 | Drought Stress(Tissue:root) | 0.000 |
| SRR2967015 | Control (Tissue:root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.736 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.373 |
| SRR9715739 | Root | 0.284 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.206 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 0.282 |
| SRR8400027 | Control-Root | 0.116 |