Gene detail information of Glyur000027s00001539.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G56040.20Leucine-rich receptor-like protein kinase family protein
NRKHN31693.10Putative LRR receptor-like serine/threonine-protein kinase [Glycine soja]
COGYP_004775215.16.00E-58RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|C0LGR3|Y4265_ARATH0Probable LRR receptor-like serine/threonine-protein kinase At4g26540 (Precursor)
trEMBLtr|K7MQF9|K7MQF9_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G08190.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00027197126200927+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000027s00001539.1PF08263.7LRRNT_238782.30E-10
Glyur000027s00001539.1PF13855.1LRR_83253838.40E-09
Glyur000027s00001539.1PF13855.1LRR_83974555.40E-07
Glyur000027s00001539.1PF13855.1LRR_84675271.60E-06
Glyur000027s00001539.1PF13855.1LRR_86146691.50E-06
Glyur000027s00001539.1PF00069.20Pkinase77310182.00E-40


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control19.654
SRR1783600control19.684
SRR1783602moderate drought stress6.500
SRR1811619moderate drought stress6.429

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.375
DRR006520Root Summer glycyrrhizin high producing strain2.481
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.000
DRR006523Root Summer glycyrrhizin low producing strain1.045
DRR006524Root Summer glycyrrhizin low producing strain0.976
DRR006525Leaf Summer glycyrrhizin high producing strain2.717
DRR006526Leaf Summer glycyrrhizin high producing strain2.851

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)26.187
SRR2868004Drought Stress(Tissue:root)21.878
SRR2967015Control (Tissue:root)13.723

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave0.958
SRR9715740Leave1.047
SRR9715741Leave0.403
SRR9715739Root4.687
SRR9715742Root7.307
SRR9715743Root6.257

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h0.945
SRR8749028MeJA induced 9h0.965
SRR8749029MeJA induced 9h0.143
SRR8749030Uninduced0.231
SRR8749031Uninduced0.000
SRR8749032Uninduced0.008

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root33.797
SRR8400027Control-Root37.054

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved