Gene detail information of Glyur000027s00001595.4


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G46970.10alpha-glucan phosphorylase 2
NRKEH34154.10glycogen/starch/alpha-glucan phosphorylase family protein [Medicago truncatula]
COGYP_003250166.10glycogen/starch/alpha-glucan phosphorylase [Fibrobacter succinogenes subsp. succinogenes S85]
Swissprottr|P53537|PHSH_VICFA0Alpha-glucan phosphorylase, H isozyme
trEMBLtr|A0A072UWD1|A0A072UWD1_MEDTR0Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00027513145520614-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT35


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00688PYG, glgP EC:2.4.1.1 Starch and sucrose metabolism map00500
Biofilm formation - Escherichia colimap02026
Insulin signaling pathwaymap04910
Glucagon signaling pathwaymap04922
Insulin resistancemap04931


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004645  phosphorylase activity

GO:0008184  glycogen phosphorylase activity

GO:0030170  pyridoxal phosphate binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000027s00001595.4PF00343.15Phosphorylase1776813.00E-236
Glyur000027s00001595.4PF00343.15Phosphorylase6927589.60E-22


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control136.716
SRR1783600control136.438
SRR1783602moderate drought stress73.483
SRR1811619moderate drought stress72.973

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain104.397
DRR006520Root Summer glycyrrhizin high producing strain103.984
DRR006521Root Winter glycyrrhizin high producing strain49.844
DRR006522Root Winter glycyrrhizin high producing strain48.062
DRR006523Root Summer glycyrrhizin low producing strain88.131
DRR006524Root Summer glycyrrhizin low producing strain87.947
DRR006525Leaf Summer glycyrrhizin high producing strain332.433
DRR006526Leaf Summer glycyrrhizin high producing strain329.394

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)38.984
SRR2868004Drought Stress(Tissue:root)28.748
SRR2967015Control (Tissue:root)25.350

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave34.202
SRR9715740Leave46.305
SRR9715741Leave30.707
SRR9715739Root24.363
SRR9715742Root86.684
SRR9715743Root77.311

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h10.612
SRR8749028MeJA induced 9h24.834
SRR8749029MeJA induced 9h8.294
SRR8749030Uninduced7.694
SRR8749031Uninduced2.704
SRR8749032Uninduced3.591

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root112.943
SRR8400027Control-Root119.346

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved