Gene detail information of Glyur000028s00003476.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G42740.10Sugar isomerase (SIS) family protein
NRKHN45845.10GYF domain-containing protein mpd2 [Glycine soja]
COGYP_005443733.11.00E-141glucose-6-phosphate isomerase [Caldilinea aerophila DSM 14535 = NBRC 104270]
Swissprottr|P54243|G6PI_OENME0Glucose-6-phosphate isomerase, cytosolic
trEMBLtr|K7KHV5|K7KHV5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G03500.3}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00028649735856-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01810GPI, pgi EC:5.3.1.9 Carbon metabolism map01200
Glycolysis / Gluconeogenesismap00010
Pentose phosphate pathwaymap00030
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006094  gluconeogenesis

GO:0006096  glycolytic process


molecular_function

GO:0004347  glucose-6-phosphate isomerase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000028s00003476.2PF00342.14PGI103011.30E-120


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control40.459
SRR1783600control40.379
SRR1783602moderate drought stress53.178
SRR1811619moderate drought stress52.509

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain46.234
DRR006520Root Summer glycyrrhizin high producing strain46.391
DRR006521Root Winter glycyrrhizin high producing strain38.965
DRR006522Root Winter glycyrrhizin high producing strain38.724
DRR006523Root Summer glycyrrhizin low producing strain36.515
DRR006524Root Summer glycyrrhizin low producing strain36.577
DRR006525Leaf Summer glycyrrhizin high producing strain17.781
DRR006526Leaf Summer glycyrrhizin high producing strain17.728

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)47.791
SRR2868004Drought Stress(Tissue:root)57.897
SRR2967015Control (Tissue:root)57.709

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave29.383
SRR9715740Leave33.615
SRR9715741Leave37.160
SRR9715739Root35.723
SRR9715742Root54.801
SRR9715743Root53.318

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h43.297
SRR8749028MeJA induced 9h44.062
SRR8749029MeJA induced 9h29.065
SRR8749030Uninduced32.631
SRR8749031Uninduced31.791
SRR8749032Uninduced37.117

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root58.630
SRR8400027Control-Root60.248

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved