Gene detail information of Glyur000028s00003509.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G66460.12.00E-114Glycosyl hydrolase superfamily protein
NRXP_003528027.11.30E-178PREDICTED: mannan endo-1,4-beta-mannosidase 7-like [Glycine max]
COGYP_003324408.11.00E-60glycoside hydrolase family protein [Thermobaculum terrenum ATCC BAA-798]
Swissprottr|Q9FJZ3|MAN7_ARATH4.00E-141Mannan endo-1,4-beta-mannosidase 7 (Precursor)
trEMBLtr|I1K7Q5|I1K7Q5_SOYBN5.00E-179Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G03350.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00028157684161395+


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGH5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K19355MAN EC:3.2.1.78 Fructose and mannose metabolism map00051


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process


molecular_function

GO:0004553  hydrolase activity, hydrolyzing O-glycosyl compounds


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000028s00003509.1PF00150.13Cellulase672551.20E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control79.773
SRR1783600control77.871
SRR1783602moderate drought stress27.653
SRR1811619moderate drought stress25.529

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.102
DRR006520Root Summer glycyrrhizin high producing strain23.706
DRR006521Root Winter glycyrrhizin high producing strain0.000
DRR006522Root Winter glycyrrhizin high producing strain0.008
DRR006523Root Summer glycyrrhizin low producing strain9.666
DRR006524Root Summer glycyrrhizin low producing strain9.977
DRR006525Leaf Summer glycyrrhizin high producing strain8.934
DRR006526Leaf Summer glycyrrhizin high producing strain9.004

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.597
SRR2868004Drought Stress(Tissue:root)9.271
SRR2967015Control (Tissue:root)7.257

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave10.967
SRR9715740Leave4.922
SRR9715741Leave4.551
SRR9715739Root4.275
SRR9715742Root9.175
SRR9715743Root7.705

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.950
SRR8749028MeJA induced 9h5.536
SRR8749029MeJA induced 9h4.993
SRR8749030Uninduced0.101
SRR8749031Uninduced0.000
SRR8749032Uninduced0.051

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root103.710
SRR8400027Control-Root106.487

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved