Gene detail information of Glyur000028s00003513.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G27680.10ADPGLC-PPase large subunit
NRXP_003528021.10PREDICTED: glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic isoform X1 [Glycine max]
COGYP_005068635.10glucose-1-phosphate adenylyltransferase [Arthrospira platensis NIES-39]
Swissprottr|P55233|GLGL1_BETVU0Glucose-1-phosphate adenylyltransferase large subunit, chloroplastic/amyloplastic (Precursor)
trEMBLtr|V7ATH2|V7ATH2_PHAVU0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00028168757173602-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00975glgC EC:2.7.7.27 Starch and sucrose metabolism map00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026


Gene Ontology

biological_process

GO:0005978  glycogen biosynthetic process

GO:0009058  biosynthetic process


molecular_function

GO:0008878  glucose-1-phosphate adenylyltransferase activity

GO:0016779  nucleotidyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000028s00003513.1PF00483.18NTP_transferase1043842.20E-79


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control73.002
SRR1783600control73.413
SRR1783602moderate drought stress107.164
SRR1811619moderate drought stress106.915

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain44.147
DRR006520Root Summer glycyrrhizin high producing strain43.808
DRR006521Root Winter glycyrrhizin high producing strain79.601
DRR006522Root Winter glycyrrhizin high producing strain78.010
DRR006523Root Summer glycyrrhizin low producing strain27.957
DRR006524Root Summer glycyrrhizin low producing strain28.300
DRR006525Leaf Summer glycyrrhizin high producing strain9.111
DRR006526Leaf Summer glycyrrhizin high producing strain9.033

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)54.363
SRR2868004Drought Stress(Tissue:root)50.692
SRR2967015Control (Tissue:root)41.623

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.516
SRR9715740Leave11.721
SRR9715741Leave12.781
SRR9715739Root9.596
SRR9715742Root53.346
SRR9715743Root38.628

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h25.881
SRR8749028MeJA induced 9h27.735
SRR8749029MeJA induced 9h23.873
SRR8749030Uninduced8.156
SRR8749031Uninduced5.015
SRR8749032Uninduced8.215

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root111.620
SRR8400027Control-Root116.316

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved