Gene detail information of Glyur000028s00003536.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75430.1 | 5.00E-87 | BEL1-like homeodomain 11 |
| NR | XP_003523567.1 | 0 | PREDICTED: BEL1-like homeodomain protein 11-like isoform X1 [Glycine max] |
| Swissprot | tr|Q1PFD1|BLH11_ARATH | 2.00E-105 | BEL1-like homeodomain protein 11 |
| trEMBL | tr|I1K7P3|I1K7P3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G03210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00028 | 297668 | 299559 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000028s00003536.1 | PF07526.6 | POX | 178 | 308 | 9.70E-38 |
| Glyur000028s00003536.1 | PF05920.6 | Homeobox_KN | 376 | 415 | 1.90E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.278 |
| SRR1783600 | control | 3.259 |
| SRR1783602 | moderate drought stress | 3.216 |
| SRR1811619 | moderate drought stress | 3.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.941 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.935 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.242 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.240 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.240 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.757 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.805 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 3.378 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.812 |
| SRR2967015 | Control (Tissue:root) | 4.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.199 |
| SRR9715740 | Leave | 0.822 |
| SRR9715741 | Leave | 0.649 |
| SRR9715739 | Root | 2.093 |
| SRR9715742 | Root | 3.046 |
| SRR9715743 | Root | 2.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.336 |
| SRR8749028 | MeJA induced 9h | 0.168 |
| SRR8749029 | MeJA induced 9h | 0.088 |
| SRR8749030 | Uninduced | 0.270 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.105 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.252 |
| SRR8400027 | Control-Root | 4.889 |