Gene detail information of Glyur000029s00003643.3


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G19070.11.00E-85spermidine hydroxycinnamoyl transferase
NRXP_003599037.10Anthranilate N-benzoyltransferase protein [Medicago truncatula]
Swissprottr|O64470|SHT_ARATH1.00E-101Spermidine hydroxycinnamoyl transferase
trEMBLtr|G7J1R6|G7J1R6_MEDTR0Spermidine hydroxycinnamoyl transferase {ECO:0000313|EMBL:AES69288.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00029354556361977-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K13065E2.3.1.133, HCT EC:2.3.1.133 Phenylpropanoid biosynthesis map00940
Stilbenoid, diarylheptanoid and gingerol biosynthesismap00945
Flavonoid biosynthesismap00941


Gene Ontology

molecular_function

GO:0016747  transferase activity, transferring acyl groups other than amino-acyl groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000029s00003643.3PF02458.10Transferase93096.30E-65
Glyur000029s00003643.3PF02458.10Transferase3434626.70E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control4.111
SRR1783600control4.043
SRR1783602moderate drought stress6.045
SRR1811619moderate drought stress6.144

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain5.264
DRR006520Root Summer glycyrrhizin high producing strain5.043
DRR006521Root Winter glycyrrhizin high producing strain3.442
DRR006522Root Winter glycyrrhizin high producing strain3.303
DRR006523Root Summer glycyrrhizin low producing strain9.053
DRR006524Root Summer glycyrrhizin low producing strain8.944
DRR006525Leaf Summer glycyrrhizin high producing strain63.119
DRR006526Leaf Summer glycyrrhizin high producing strain62.839

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.312
SRR2868004Drought Stress(Tissue:root)4.555
SRR2967015Control (Tissue:root)3.816

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave87.123
SRR9715740Leave139.256
SRR9715741Leave28.109
SRR9715739Root1.174
SRR9715742Root0.965
SRR9715743Root0.755

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.666
SRR8749028MeJA induced 9h3.619
SRR8749029MeJA induced 9h1.559
SRR8749030Uninduced3.428
SRR8749031Uninduced1.940
SRR8749032Uninduced2.076

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.276
SRR8400027Control-Root3.320

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved