Gene detail information of Glyur000029s00003649.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G42810.20protein phosphatase 5.2
NRXP_004499994.10PREDICTED: serine/threonine-protein phosphatase 5-like isoform X1 [Cicer arietinum]
COGNP_618150.11.00E-33serine/threonine specific protein phosphatase [Methanosarcina acetivorans C2A]
Swissprottr|Q84K11|PPP5_SOLLC0Serine/threonine-protein phosphatase 5
trEMBLtr|K7LA10|K7LA10_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G42380.2}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00029404285412725-


Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K04460PPP5C EC:3.1.3.16 MAPK signaling pathway map04010


Gene Ontology

biological_process

GO:0006470  protein dephosphorylation


cellular_component

GO:0005634  nucleus

GO:0005737  cytoplasm


molecular_function

GO:0004721  phosphoprotein phosphatase activity

GO:0005515  protein binding

GO:0016787  hydrolase activity

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000029s00003649.1PF13414.1TPR_119721.20E-16
Glyur000029s00003649.1PF08321.7PPP51101792.20E-08
Glyur000029s00003649.1PF08321.7PPP52032631.20E-20
Glyur000029s00003649.1PF00149.23Metallophos2704641.10E-38


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control20.923
SRR1783600control21.103
SRR1783602moderate drought stress20.846
SRR1811619moderate drought stress20.791

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain26.945
DRR006520Root Summer glycyrrhizin high producing strain26.925
DRR006521Root Winter glycyrrhizin high producing strain30.515
DRR006522Root Winter glycyrrhizin high producing strain29.766
DRR006523Root Summer glycyrrhizin low producing strain25.632
DRR006524Root Summer glycyrrhizin low producing strain25.870
DRR006525Leaf Summer glycyrrhizin high producing strain20.185
DRR006526Leaf Summer glycyrrhizin high producing strain20.203

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)51.037
SRR2868004Drought Stress(Tissue:root)49.391
SRR2967015Control (Tissue:root)44.935

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave23.664
SRR9715740Leave29.834
SRR9715741Leave28.986
SRR9715739Root7.073
SRR9715742Root18.742
SRR9715743Root16.380

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h49.264
SRR8749028MeJA induced 9h44.664
SRR8749029MeJA induced 9h38.541
SRR8749030Uninduced32.516
SRR8749031Uninduced28.815
SRR8749032Uninduced20.367

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root36.777
SRR8400027Control-Root39.517