Gene detail information of Glyur000029s00003649.1 |
Functional Annotation
Database | Orthologs | E value | Annotation |
---|---|---|---|
TAIR | AT2G42810.2 | 0 | protein phosphatase 5.2 |
NR | XP_004499994.1 | 0 | PREDICTED: serine/threonine-protein phosphatase 5-like isoform X1 [Cicer arietinum] |
COG | NP_618150.1 | 1.00E-33 | serine/threonine specific protein phosphatase [Methanosarcina acetivorans C2A] |
Swissprot | tr|Q84K11|PPP5_SOLLC | 0 | Serine/threonine-protein phosphatase 5 |
trEMBL | tr|K7LA10|K7LA10_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G42380.2} |
Sequence
Transcript Sequence |
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Protein Sequence |
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Location information(JBrowse)
Scaffold | Start | End | Strand |
---|---|---|---|
Scaffold00029 | 404285 | 412725 | - |
Gene family
Gene family | subfamily |
---|---|
-- | -- |
KEGG pathway
KO | Enzyme | Enzyme ID | pathway | mapID |
---|---|---|---|---|
K04460 | PPP5C | EC:3.1.3.16 | MAPK signaling pathway | map04010 |
Gene Ontology
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Pfam domain
Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|---|
Glyur000029s00003649.1 | PF13414.1 | TPR_11 | 9 | 72 | 1.20E-16 |
Glyur000029s00003649.1 | PF08321.7 | PPP5 | 110 | 179 | 2.20E-08 |
Glyur000029s00003649.1 | PF08321.7 | PPP5 | 203 | 263 | 1.20E-20 |
Glyur000029s00003649.1 | PF00149.23 | Metallophos | 270 | 464 | 1.10E-38 |
Expression pattern
SRA Experiment | Description | TPM |
---|---|---|
SRR1783599 | control | 20.923 |
SRR1783600 | control | 21.103 |
SRR1783602 | moderate drought stress | 20.846 |
SRR1811619 | moderate drought stress | 20.791 |
SRA Experiment | Description | TPM |
---|---|---|
DRR006519 | Root Summer glycyrrhizin high producing strain | 26.945 |
DRR006520 | Root Summer glycyrrhizin high producing strain | 26.925 |
DRR006521 | Root Winter glycyrrhizin high producing strain | 30.515 |
DRR006522 | Root Winter glycyrrhizin high producing strain | 29.766 |
DRR006523 | Root Summer glycyrrhizin low producing strain | 25.632 |
DRR006524 | Root Summer glycyrrhizin low producing strain | 25.870 |
DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.185 |
DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.203 |
SRA Experiment | Description | TPM |
---|---|---|
SRR2867873 | Salt Stress(Tissue:root) | 51.037 |
SRR2868004 | Drought Stress(Tissue:root) | 49.391 |
SRR2967015 | Control (Tissue:root) | 44.935 |
SRA Experiment | Description | TPM |
---|---|---|
SRR9715738 | Leave | 23.664 |
SRR9715740 | Leave | 29.834 |
SRR9715741 | Leave | 28.986 |
SRR9715739 | Root | 7.073 |
SRR9715742 | Root | 18.742 |
SRR9715743 | Root | 16.380 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8749027 | MeJA induced 9h | 49.264 |
SRR8749028 | MeJA induced 9h | 44.664 |
SRR8749029 | MeJA induced 9h | 38.541 |
SRR8749030 | Uninduced | 32.516 |
SRR8749031 | Uninduced | 28.815 |
SRR8749032 | Uninduced | 20.367 |
SRA Experiment | Description | TPM |
---|---|---|
SRR8400026 | NaCl treatment-Root | 36.777 |
SRR8400027 | Control-Root | 39.517 |