Gene detail information of Glyur000029s00003668.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G58790.11.00E-174galacturonosyltransferase 15
NRXP_003532100.10PREDICTED: probable galacturonosyltransferase 15-like [Glycine max]
COGYP_002770215.15.00E-10hypothetical protein BBR47_07340 [Brevibacillus brevis NBRC 100599]
Swissprottr|Q8L4B0|GAUTF_ARATH0Probable galacturonosyltransferase 15
trEMBLtr|I1KY25|I1KY25_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G42280.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00029507935516141-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGT8


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0016757  transferase activity, transferring glycosyl groups

GO:0047262  polygalacturonate 4-alpha-galacturonosyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000029s00003668.1PF01501.15Glyco_transf_81805091.10E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.980
SRR1783600control17.119
SRR1783602moderate drought stress17.034
SRR1811619moderate drought stress16.842

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.619
DRR006520Root Summer glycyrrhizin high producing strain16.349
DRR006521Root Winter glycyrrhizin high producing strain16.912
DRR006522Root Winter glycyrrhizin high producing strain16.459
DRR006523Root Summer glycyrrhizin low producing strain45.309
DRR006524Root Summer glycyrrhizin low producing strain45.300
DRR006525Leaf Summer glycyrrhizin high producing strain7.216
DRR006526Leaf Summer glycyrrhizin high producing strain7.267

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)14.866
SRR2868004Drought Stress(Tissue:root)19.357
SRR2967015Control (Tissue:root)18.158

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave24.977
SRR9715740Leave19.151
SRR9715741Leave30.545
SRR9715739Root5.718
SRR9715742Root17.266
SRR9715743Root14.127

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.880
SRR8749028MeJA induced 9h18.757
SRR8749029MeJA induced 9h12.093
SRR8749030Uninduced9.875
SRR8749031Uninduced0.898
SRR8749032Uninduced2.030

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root17.855
SRR8400027Control-Root21.230

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved