Gene detail information of Glyur000030s00002332.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G12780.15.00E-170UDP-D-glucose/UDP-D-galactose 4-epimerase 1
NRO65780.10RecName: Full=UDP-glucose 4-epimerase GEPI42; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase [Cyamopsis tetragonoloba]
COGYP_007424767.17.00E-144UDP-glucose 4-epimerase / UDP-N-acetylglucosamine 4-epimerase [Bacillus thuringiensis serovar kurstaki str. HD73]
Swissprottr|O65780|GALE1_CYATE0UDP-glucose 4-epimerase GEPI42
trEMBLtr|V7C9Y9|V7C9Y9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW26095.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00030248168250099-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01784galE, GALE EC:5.1.3.2 Galactose metabolism map00052
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0005975  carbohydrate metabolic process

GO:0006012  galactose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0003978  UDP-glucose 4-epimerase activity

GO:0016857  racemase and epimerase activity, acting on carbohydrates and derivatives

GO:0050662  coenzyme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000030s00002332.1PF01370.16Epimerase152663.60E-50
Glyur000030s00002332.1PF13950.1Epimerase_Csub2933541.20E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.828
SRR1783600control9.006
SRR1783602moderate drought stress8.077
SRR1811619moderate drought stress7.962

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain20.904
DRR006520Root Summer glycyrrhizin high producing strain20.386
DRR006521Root Winter glycyrrhizin high producing strain2.538
DRR006522Root Winter glycyrrhizin high producing strain2.480
DRR006523Root Summer glycyrrhizin low producing strain12.652
DRR006524Root Summer glycyrrhizin low producing strain12.668
DRR006525Leaf Summer glycyrrhizin high producing strain1.996
DRR006526Leaf Summer glycyrrhizin high producing strain2.010

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)40.313
SRR2868004Drought Stress(Tissue:root)37.831
SRR2967015Control (Tissue:root)26.884

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.127
SRR9715740Leave5.378
SRR9715741Leave3.545
SRR9715739Root15.328
SRR9715742Root21.622
SRR9715743Root19.984

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.557
SRR8749028MeJA induced 9h2.694
SRR8749029MeJA induced 9h2.984
SRR8749030Uninduced1.470
SRR8749031Uninduced0.156
SRR8749032Uninduced1.179

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root65.717
SRR8400027Control-Root97.751

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved