Gene detail

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Gene detail information of Glyur000030s00002335.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G02450.2	2.00E-89	NAC domain containing protein 35
NR	XP_003528722.1	2.95E-168	PREDICTED: protein FEZ-like [Glycine max]
Swissprot	tr\|Q9SK55\|NAC42_ARATH	2.00E-60	Transcription factor JUNGBRUNNEN 1
trEMBL	tr\|I1KNQ2\|I1KNQ2_SOYBN	1.00E-168	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G40140.1}

Sequence

Transcript Sequence

>Glyur000030s00002335.1
GACAATTTAACCATCAAATATCTCTTATCTCTGCCTAACACTATAATCCAAATAAATATATTATTACCTTTTGGAGTATAAAGAGGAGAGGGCGAACCCAATTAGGTAGAGTGAGTAGTAGAATTGTATAAGTTGCAAGCAGGCAGATCAGTCGTCGATGGCAATTGCAGCGGCAACATCATCACCACCCACCATGAGTTTGAGTCACAGCCACAGCCACAGCCACGAAGATGCGACAACCACCACTTCCACCGCCAACGACAGCGTCATTAATAACACGAAGCTGGCAGTTGATGACGATCACGAGCACGACATGGTGATGCCTGGGTTTCGTTTCCACCCAACCGAAGAAGAGTTGGTGGAGTTCTACCTTCGCCGTAAGGTGGAGGGAAAGCGTTTCAATGTTGAGCTCATCACTTTCCTCGATCTTTATCGCTATGACCCTTGGGAACTTCCTGCGTTGGCAGCAATTGGGGAGAAGGAGTGGTACTTCTATGTGCCGAGGGATAGGAAGTATAGGAACGGGGATCGTCCGAACCGGGTGACCACGTCTGGGTATTGGAAGGCAACCGGAGCCGACCGGATGATCCGAACCGAAAACTTCCGGTCAATCGGTCTGAAGAAAACCCTAGTTTTCTATTCTGGGAAAGCTCCAAAGGGCATCCGAACCAGCTGGATTATGAACGAGTATCGCTTGCCCCAACACGAAACCGAACGATATCAAAAGGCAGAGATATCGCTATGCCGGGTATACAAGAGAGCAGGAGTAGAAGACCATCCCTCCCTCCCTCGCTGCCTCCCTTCAACTGGCCGGCCATCCACCAGCTCATCCACAAGATCATCAGCCTCAGCTGCAGACCACAAGAAGCACATTATTATTAATCATGAAATGGTTCATCAGCACAACAACAACAACAACAACAACATGGAGGGAGGAAGCAGCAGTAGTGATCATAATAATAATAATATTCATGTGGCCACACCTCTGGGGCTCTCCAAGTACAACGCTTACCGAGGAAGGGTTCCAGATGATGATGATGCAGCATCAGCAGCAGCAGCATCTAAGCATGCCAACCCATTGATGTTCCCAGTTGGTGCTGGTGGTTCAAATTCCAATTCCAACAACAGTGGTGGTGGTGCAATGATGGATGAGCTGAACAGGCTATATAAGTACCCATCCCAATCCCAAATCAATCACCATCACTTGTCTACTCTGCTGATGCAACCACCGACGCCTCTCAACTCCCTACCAAATCCACTTCCAACTACCTTCTCTGACCGACTGTGGGATTGGAACCCAATCCCCGAGGACGTCCATCCCCCACCTCCCAATAACAACATGCCCTCCTTCAAGTAA

Protein Sequence

Location information(JBrowse)

Scaffold	Start	End	Strand
Scaffold00030	256227	259000	-

Gene family

Gene family	subfamily
Transcription Factors Family	NAC

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function GO:0003677 DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000030s00002335.1	PF02365.10	NAM	55	180	2.40E-47

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.767
SRR1783600	control	0.859
SRR1783602	moderate drought stress	1.538
SRR1811619	moderate drought stress	1.573

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	12.713
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.130

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress(Tissue:root)	0.215
SRR2868004	Drought Stress(Tissue:root)	0.453
SRR2967015	Control (Tissue:root)	0.365

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leave	9.536
SRR9715740	Leave	7.968
SRR9715741	Leave	4.651
SRR9715739	Root	0.502
SRR9715742	Root	0.575
SRR9715743	Root	0.404

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment-Root	0.469
SRR8400027	Control-Root	1.502