Gene detail information of Glyur000031s00004336.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G22840.1 | 2.00E-72 | growth-regulating factor 1 |
| NR | KEH39998.1 | 0 | growth-regulating factor [Medicago truncatula] |
| Swissprot | tr|Q6AWY3|GRF6_ORYSJ | 3.00E-94 | Growth-regulating factor 6 |
| trEMBL | tr|A0A072VEY4|A0A072VEY4_MEDTR | 0 | Growth-regulating factor {ECO:0000313|EMBL:KEH39998.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 8305 | 11938 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | GRF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000031s00004336.1 | PF08880.6 | QLQ | 153 | 189 | 2.50E-18 |
| Glyur000031s00004336.1 | PF08879.5 | WRC | 223 | 267 | 9.20E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.601 |
| SRR1783600 | control | 4.528 |
| SRR1783602 | moderate drought stress | 5.385 |
| SRR1811619 | moderate drought stress | 5.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.163 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.069 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 26.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 25.909 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.388 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.308 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.604 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.575 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.607 |
| SRR2868004 | Drought Stress(Tissue:root) | 9.009 |
| SRR2967015 | Control (Tissue:root) | 15.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 1.666 |
| SRR9715740 | Leave | 1.628 |
| SRR9715741 | Leave | 1.484 |
| SRR9715739 | Root | 1.415 |
| SRR9715742 | Root | 1.374 |
| SRR9715743 | Root | 1.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.689 |
| SRR8749028 | MeJA induced 9h | 13.626 |
| SRR8749029 | MeJA induced 9h | 12.002 |
| SRR8749030 | Uninduced | 8.462 |
| SRR8749031 | Uninduced | 5.732 |
| SRR8749032 | Uninduced | 9.433 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 7.989 |
| SRR8400027 | Control-Root | 9.390 |