Gene detail information of Glyur000031s00004354.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G10130.16.00E-13endoplasmic reticulum-type calcium-transporting ATPase 3
NRXP_004501511.11.36E-14PREDICTED: calcium-transporting ATPase 3, endoplasmic reticulum-type-like [Cicer arietinum]
Swissprottr|Q9SY55|ECA3_ARATH5.00E-14Calcium-transporting ATPase 3, endoplasmic reticulum-type
trEMBLtr|K7KI34|K7KI34_SOYBN2.00E-14Calcium-transporting ATPase {ECO:0000256|RuleBase:RU361146}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00031108975110413-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K05853ATP2A EC:3.6.3.8 Calcium signaling pathway map04020
cGMP - PKG signaling pathwaymap04022
Pancreatic secretionmap04972
Alzheimer's diseasemap05010


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000031s00004354.1PF00690.21Cation_ATPase_N981330.00024


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.200
SRR1783600control12.501
SRR1783602moderate drought stress9.501
SRR1811619moderate drought stress8.480

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain6.866
DRR006520Root Summer glycyrrhizin high producing strain6.258
DRR006521Root Winter glycyrrhizin high producing strain2.465
DRR006522Root Winter glycyrrhizin high producing strain4.232
DRR006523Root Summer glycyrrhizin low producing strain5.981
DRR006524Root Summer glycyrrhizin low producing strain6.160
DRR006525Leaf Summer glycyrrhizin high producing strain1.637
DRR006526Leaf Summer glycyrrhizin high producing strain2.853

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)32.441
SRR2868004Drought Stress(Tissue:root)31.041
SRR2967015Control (Tissue:root)33.490

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave4.441
SRR9715740Leave4.365
SRR9715741Leave6.400
SRR9715739Root4.520
SRR9715742Root19.913
SRR9715743Root13.948

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.377
SRR8749028MeJA induced 9h27.176
SRR8749029MeJA induced 9h2.948
SRR8749030Uninduced1.496
SRR8749031Uninduced0.717
SRR8749032Uninduced0.793

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root37.965
SRR8400027Control-Root38.248

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved