Gene detail information of Glyur000031s00004382.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G27730.15.00E-44salt tolerance zinc finger
NRXP_003525928.11.19E-100PREDICTED: zinc finger protein ZAT10 [Glycine max]
Swissprottr|Q96289|ZAT10_ARATH3.00E-60Zinc finger protein ZAT10
trEMBLtr|I0AW24|I0AW24_SOYBN4.00E-101Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G04840.1} (Fragment)

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00031249593250315+


Gene family

Gene familysubfamily
Transcription Factors FamilyC2H2
EAR motif-containing ProteinsC2H2


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
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Gene Ontology

molecular_function

GO:0046872  metal ion binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000031s00004382.1PF13912.1zf-C2H2_6871116.40E-11
Glyur000031s00004382.1PF13912.1zf-C2H2_61431679.60E-10


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control8.135
SRR1783600control8.210
SRR1783602moderate drought stress9.474
SRR1811619moderate drought stress8.157

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain489.255
DRR006520Root Summer glycyrrhizin high producing strain484.420
DRR006521Root Winter glycyrrhizin high producing strain164.787
DRR006522Root Winter glycyrrhizin high producing strain158.950
DRR006523Root Summer glycyrrhizin low producing strain867.924
DRR006524Root Summer glycyrrhizin low producing strain866.594
DRR006525Leaf Summer glycyrrhizin high producing strain415.828
DRR006526Leaf Summer glycyrrhizin high producing strain408.906

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)81.691
SRR2868004Drought Stress(Tissue:root)478.339
SRR2967015Control (Tissue:root)1117.235

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2546.468
SRR9715740Leave2205.069
SRR9715741Leave2839.127
SRR9715739Root2894.523
SRR9715742Root3263.822
SRR9715743Root2933.967

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2014.696
SRR8749028MeJA induced 9h1099.821
SRR8749029MeJA induced 9h1335.079
SRR8749030Uninduced1785.839
SRR8749031Uninduced501.997
SRR8749032Uninduced1343.289

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root233.470
SRR8400027Control-Root363.137

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved