Gene detail information of Glyur000031s00004415.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G00340.1 | 1.00E-47 | receptor-like protein kinase 4 |
| NR | XP_007136718.1 | 0 | hypothetical protein PHAVU_009G068300g [Phaseolus vulgaris] |
| COG | YP_001958461.1 | 4.00E-15 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| Swissprot | tr|P17801|KPRO_MAIZE | 7.00E-154 | Putative receptor protein kinase ZmPK1 (Precursor) |
| trEMBL | tr|V7AST9|V7AST9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08712.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 383704 | 386154 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.9.2 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000031s00004415.1 | PF01453.19 | B_lectin | 78 | 183 | 4.60E-24 |
| Glyur000031s00004415.1 | PF00954.15 | S_locus_glycop | 246 | 323 | 1.50E-10 |
| Glyur000031s00004415.1 | PF00069.20 | Pkinase | 526 | 666 | 2.10E-26 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 1.917 |
| SRR2868004 | Drought Stress(Tissue:root) | 1.712 |
| SRR2967015 | Control (Tissue:root) | 0.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.177 |
| SRR8749028 | MeJA induced 9h | 0.001 |
| SRR8749029 | MeJA induced 9h | 0.028 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.029 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 1.931 |
| SRR8400027 | Control-Root | 0.423 |