Gene detail information of Glyur000031s00004417.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G67300.14.00E-55myb domain protein r1
NRKDP41681.17.74E-117hypothetical protein JCGZ_16088 [Jatropha curcas]
Swissprottr|Q9FDW1|MYB44_ARATH2.00E-77Transcription factor MYB44
trEMBLtr|A0A067KZQ6|A0A067KZQ6_JATCU3.00E-117Uncharacterized protein {ECO:0000313|EMBL:KDP41681.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00031397915398745-


Gene family

Gene familysubfamily
Transcription Factors FamilyMYB
EAR motif-containing ProteinsMYB


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

molecular_function

GO:0003677  DNA binding

GO:0003682  chromatin binding



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000031s00004417.1PF13921.1Myb_DNA-bind_68661.40E-18


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.759
SRR1783600control9.801
SRR1783602moderate drought stress24.019
SRR1811619moderate drought stress23.870

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain102.992
DRR006520Root Summer glycyrrhizin high producing strain101.803
DRR006521Root Winter glycyrrhizin high producing strain28.330
DRR006522Root Winter glycyrrhizin high producing strain25.578
DRR006523Root Summer glycyrrhizin low producing strain197.060
DRR006524Root Summer glycyrrhizin low producing strain197.422
DRR006525Leaf Summer glycyrrhizin high producing strain23.946
DRR006526Leaf Summer glycyrrhizin high producing strain24.521

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)24.232
SRR2868004Drought Stress(Tissue:root)64.083
SRR2967015Control (Tissue:root)163.524

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave430.027
SRR9715740Leave211.724
SRR9715741Leave452.707
SRR9715739Root268.914
SRR9715742Root356.286
SRR9715743Root324.157

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h729.807
SRR8749028MeJA induced 9h591.403
SRR8749029MeJA induced 9h549.829
SRR8749030Uninduced545.487
SRR8749031Uninduced351.658
SRR8749032Uninduced641.434

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root26.882
SRR8400027Control-Root61.627

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved