Gene detail information of Glyur000031s00004427.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G43020.10Leucine-rich repeat protein kinase family protein
NRXP_004501553.10PREDICTED: probable inactive receptor kinase At5g67200-like [Cicer arietinum]
COGYP_001192956.13.00E-16two component regulator [Flavobacterium johnsoniae UW101]
Swissprottr|Q93Y06|Y5720_ARATH0Probable inactive receptor kinase At5g67200 (Precursor)
trEMBLtr|G7J6Z2|G7J6Z2_MEDTR0LRR receptor-like kinase family protein {ECO:0000313|EMBL:AES73336.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00031471530475548+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.13.5


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000031s00004427.1PF08263.7LRRNT_243780.00017
Glyur000031s00004427.1PF13855.1LRR_81331929.20E-10
Glyur000031s00004427.1PF00560.28LRR_12032200.04
Glyur000031s00004427.1PF00069.20Pkinase3866383.40E-34


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.759
SRR1783600control24.066
SRR1783602moderate drought stress23.596
SRR1811619moderate drought stress23.816

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.846
DRR006520Root Summer glycyrrhizin high producing strain7.804
DRR006521Root Winter glycyrrhizin high producing strain0.552
DRR006522Root Winter glycyrrhizin high producing strain0.533
DRR006523Root Summer glycyrrhizin low producing strain5.678
DRR006524Root Summer glycyrrhizin low producing strain5.886
DRR006525Leaf Summer glycyrrhizin high producing strain0.652
DRR006526Leaf Summer glycyrrhizin high producing strain0.618

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)8.099
SRR2868004Drought Stress(Tissue:root)4.326
SRR2967015Control (Tissue:root)5.432

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave3.582
SRR9715740Leave0.378
SRR9715741Leave0.907
SRR9715739Root7.073
SRR9715742Root10.757
SRR9715743Root9.450

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h7.342
SRR8749028MeJA induced 9h1.247
SRR8749029MeJA induced 9h1.469
SRR8749030Uninduced0.433
SRR8749031Uninduced0.242
SRR8749032Uninduced0.565

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root12.968
SRR8400027Control-Root18.879

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved