Gene detail information of Glyur000031s00004437.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G46480.1 | 2.00E-52 | WUSCHEL related homeobox 4 |
| NR | NP_001241420.1 | 1.39E-116 | uncharacterized protein LOC100781015 [Glycine max] |
| Swissprot | tr|Q6X7J9|WOX4_ARATH | 7.00E-65 | WUSCHEL-related homeobox 4 |
| trEMBL | tr|C6TFY4|C6TFY4_SOYBN | 5.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G04470.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00031 | 530370 | 531822 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | HB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000031s00004437.1 | PF00046.24 | Homeobox | 96 | 155 | 1.20E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 366.416 |
| SRR1783600 | control | 371.962 |
| SRR1783602 | moderate drought stress | 157.977 |
| SRR1811619 | moderate drought stress | 159.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 163.263 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 161.596 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.210 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.206 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 160.806 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 160.202 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 30.578 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 28.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 92.309 |
| SRR2868004 | Drought Stress(Tissue:root) | 67.640 |
| SRR2967015 | Control (Tissue:root) | 91.690 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 7.954 |
| SRR9715740 | Leave | 22.346 |
| SRR9715741 | Leave | 10.537 |
| SRR9715739 | Root | 58.899 |
| SRR9715742 | Root | 79.082 |
| SRR9715743 | Root | 70.811 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.902 |
| SRR8749028 | MeJA induced 9h | 0.104 |
| SRR8749029 | MeJA induced 9h | 0.836 |
| SRR8749030 | Uninduced | 0.234 |
| SRR8749031 | Uninduced | 0.094 |
| SRR8749032 | Uninduced | 0.144 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 200.352 |
| SRR8400027 | Control-Root | 248.021 |