Gene detail information of Glyur000032s00003871.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G05320.1 | 1.00E-150 | O-fucosyltransferase family protein |
| NR | XP_006605521.1 | 0 | PREDICTED: uncharacterized protein LOC100803660 isoform X2 [Glycine max] |
| trEMBL | tr|K7N0W5|K7N0W5_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G02800.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00032 | 105860 | 107146 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000032s00003871.1 | PF10250.4 | O-FucT | 73 | 372 | 1.00E-38 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.427 |
| SRR1783600 | control | 9.233 |
| SRR1783602 | moderate drought stress | 17.824 |
| SRR1811619 | moderate drought stress | 12.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.747 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.431 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.976 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.936 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.490 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.396 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 22.637 |
| SRR2868004 | Drought Stress(Tissue:root) | 19.772 |
| SRR2967015 | Control (Tissue:root) | 18.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 4.869 |
| SRR9715740 | Leave | 4.611 |
| SRR9715741 | Leave | 7.370 |
| SRR9715739 | Root | 4.884 |
| SRR9715742 | Root | 5.201 |
| SRR9715743 | Root | 5.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.901 |
| SRR8749028 | MeJA induced 9h | 5.155 |
| SRR8749029 | MeJA induced 9h | 2.952 |
| SRR8749030 | Uninduced | 6.549 |
| SRR8749031 | Uninduced | 12.804 |
| SRR8749032 | Uninduced | 7.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 17.673 |
| SRR8400027 | Control-Root | 20.336 |