Gene detail information of Glyur000032s00003915.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G35100.1 | 5.00E-162 | Exostosin family protein |
| NR | XP_004505296.1 | 0 | PREDICTED: probable glucuronosyltransferase Os04g0398600-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q6DBG8|ARAD1_ARATH | 0 | Probable arabinosyltransferase ARAD1 |
| trEMBL | tr|V7CK90|V7CK90_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW29763.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00032 | 327861 | 331409 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT47 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000032s00003915.1 | PF03016.10 | Exostosin | 113 | 429 | 1.30E-79 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 27.253 |
| SRR1783600 | control | 27.460 |
| SRR1783602 | moderate drought stress | 26.044 |
| SRR1811619 | moderate drought stress | 25.990 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 28.909 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 27.935 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.089 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.818 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.261 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.828 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 24.671 |
| SRR2868004 | Drought Stress(Tissue:root) | 24.313 |
| SRR2967015 | Control (Tissue:root) | 23.850 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.475 |
| SRR9715740 | Leave | 14.656 |
| SRR9715741 | Leave | 16.094 |
| SRR9715739 | Root | 10.204 |
| SRR9715742 | Root | 22.105 |
| SRR9715743 | Root | 19.351 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 27.227 |
| SRR8749028 | MeJA induced 9h | 17.731 |
| SRR8749029 | MeJA induced 9h | 16.508 |
| SRR8749030 | Uninduced | 11.046 |
| SRR8749031 | Uninduced | 13.230 |
| SRR8749032 | Uninduced | 13.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 24.463 |
| SRR8400027 | Control-Root | 26.001 |