Gene detail information of Glyur000032s00003930.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G01480.1 | 0 | O-fucosyltransferase family protein |
| NR | XP_004505284.1 | 0 | PREDICTED: uncharacterized protein At1g04910-like [Cicer arietinum] |
| Swissprot | tr|Q8W486|Y1491_ARATH | 2.00E-77 | Uncharacterized protein At1g04910 |
| trEMBL | tr|A0A072UNB9|A0A072UNB9_MEDTR | 0 | O-fucosyltransferase family protein {ECO:0000313|EMBL:KEH30846.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00032 | 413772 | 421002 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GTnc |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000032s00003930.1 | PF10250.4 | O-FucT | 157 | 231 | 3.00E-24 |
| Glyur000032s00003930.1 | PF10250.4 | O-FucT | 243 | 475 | 8.10E-57 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.416 |
| SRR1783600 | control | 6.569 |
| SRR1783602 | moderate drought stress | 6.088 |
| SRR1811619 | moderate drought stress | 6.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.068 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.037 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.550 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.153 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.214 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.414 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.284 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 8.115 |
| SRR2868004 | Drought Stress(Tissue:root) | 8.481 |
| SRR2967015 | Control (Tissue:root) | 8.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 2.746 |
| SRR9715740 | Leave | 1.344 |
| SRR9715741 | Leave | 2.040 |
| SRR9715739 | Root | 0.994 |
| SRR9715742 | Root | 4.497 |
| SRR9715743 | Root | 3.879 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.451 |
| SRR8749028 | MeJA induced 9h | 8.207 |
| SRR8749029 | MeJA induced 9h | 8.359 |
| SRR8749030 | Uninduced | 3.205 |
| SRR8749031 | Uninduced | 4.937 |
| SRR8749032 | Uninduced | 4.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 8.758 |
| SRR8400027 | Control-Root | 9.408 |