Gene detail information of Glyur000032s00003934.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38160.1 | 8.00E-127 | Mitochondrial transcription termination factor family protein |
| NR | XP_004505278.1 | 0 | PREDICTED: transcription termination factor, mitochondrial-like [Cicer arietinum] |
| trEMBL | tr|I3SZ16|I3SZ16_LOTJA | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK45508.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00032 | 449332 | 450339 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | mTERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000032s00003934.1 | PF02536.9 | mTERF | 34 | 116 | 2.40E-09 |
| Glyur000032s00003934.1 | PF02536.9 | mTERF | 117 | 321 | 7.80E-34 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.506 |
| SRR1783600 | control | 4.484 |
| SRR1783602 | moderate drought stress | 4.980 |
| SRR1811619 | moderate drought stress | 5.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.574 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.284 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.724 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.682 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.820 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.169 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 4.685 |
| SRR2868004 | Drought Stress(Tissue:root) | 3.787 |
| SRR2967015 | Control (Tissue:root) | 3.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 12.117 |
| SRR9715740 | Leave | 18.566 |
| SRR9715741 | Leave | 8.815 |
| SRR9715739 | Root | 4.036 |
| SRR9715742 | Root | 5.218 |
| SRR9715743 | Root | 3.892 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.878 |
| SRR8749028 | MeJA induced 9h | 2.683 |
| SRR8749029 | MeJA induced 9h | 1.465 |
| SRR8749030 | Uninduced | 1.025 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 6.299 |
| SRR8400027 | Control-Root | 6.822 |