Gene detail information of Glyur000033s00008638.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G33170.10Leucine-rich repeat receptor-like protein kinase family protein
NRXP_004514026.10PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170-like [Cicer arietinum]
COGYP_004775215.18.00E-54RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745]
Swissprottr|O49318|Y2317_ARATH0Probable leucine-rich repeat receptor-like protein kinase At2g33170 (Precursor)
trEMBLtr|V7BJL9|V7BJL9_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17228.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00033396338401745-


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.12.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000033s00008638.1PF08263.7LRRNT_234731.80E-09
Glyur000033s00008638.1PF13516.1LRR_61061280.047
Glyur000033s00008638.1PF00560.28LRR_11321540.75
Glyur000033s00008638.1PF13855.1LRR_82523116.60E-07
Glyur000033s00008638.1PF00560.28LRR_15645850.11
Glyur000033s00008638.1PF00560.28LRR_15886100.5
Glyur000033s00008638.1PF00560.28LRR_16626830.22
Glyur000033s00008638.1PF00069.20Pkinase81910872.10E-51


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control9.286
SRR1783600control9.350
SRR1783602moderate drought stress9.196
SRR1811619moderate drought stress9.211

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.177
DRR006520Root Summer glycyrrhizin high producing strain15.910
DRR006521Root Winter glycyrrhizin high producing strain4.503
DRR006522Root Winter glycyrrhizin high producing strain4.285
DRR006523Root Summer glycyrrhizin low producing strain16.402
DRR006524Root Summer glycyrrhizin low producing strain15.946
DRR006525Leaf Summer glycyrrhizin high producing strain1.040
DRR006526Leaf Summer glycyrrhizin high producing strain1.046

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)16.310
SRR2868004Drought Stress(Tissue:root)20.277
SRR2967015Control (Tissue:root)20.437

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.614
SRR9715740Leave2.246
SRR9715741Leave1.890
SRR9715739Root7.335
SRR9715742Root21.832
SRR9715743Root19.543

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h4.923
SRR8749028MeJA induced 9h11.289
SRR8749029MeJA induced 9h6.719
SRR8749030Uninduced15.221
SRR8749031Uninduced10.439
SRR8749032Uninduced5.617

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root13.869
SRR8400027Control-Root15.911

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved