Gene detail information of Glyur000033s00008647.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G24030.11.00E-94hydroxyethylthiazole kinase family protein
NRXP_004497741.19.29E-157PREDICTED: hydroxyethylthiazole kinase-like [Cicer arietinum]
COGYP_004789054.13.00E-71hydroxyethylthiazole kinase [Muricauda ruestringensis DSM 13258]
Swissprottr|Q9LIQ4|THIM_ARATH2.00E-122Hydroxyethylthiazole kinase
trEMBLtr|I3SM08|I3SM08_MEDTR1.00E-152Uncharacterized protein {ECO:0000313|EMBL:AFK41300.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00033458763461960+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K00878thiM EC:2.7.1.50 Thiamine metabolism map00730


Gene Ontology

biological_process

GO:0009228  thiamine biosynthetic process


molecular_function

GO:0004417  hydroxyethylthiazole kinase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000033s00008647.1PF02110.10HK292907.40E-71


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control12.267
SRR1783600control12.422
SRR1783602moderate drought stress18.689
SRR1811619moderate drought stress18.548

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.656
DRR006520Root Summer glycyrrhizin high producing strain13.696
DRR006521Root Winter glycyrrhizin high producing strain12.678
DRR006522Root Winter glycyrrhizin high producing strain11.959
DRR006523Root Summer glycyrrhizin low producing strain16.610
DRR006524Root Summer glycyrrhizin low producing strain15.856
DRR006525Leaf Summer glycyrrhizin high producing strain10.191
DRR006526Leaf Summer glycyrrhizin high producing strain10.178

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.241
SRR2868004Drought Stress(Tissue:root)7.823
SRR2967015Control (Tissue:root)6.958

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave16.632
SRR9715740Leave22.546
SRR9715741Leave15.302
SRR9715739Root9.112
SRR9715742Root11.217
SRR9715743Root11.689

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h11.743
SRR8749028MeJA induced 9h13.166
SRR8749029MeJA induced 9h10.767
SRR8749030Uninduced9.583
SRR8749031Uninduced5.977
SRR8749032Uninduced7.928

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.365
SRR8400027Control-Root5.580

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved