Gene detail information of Glyur000034s00002904.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G09540.1 | 3.00E-76 | myb domain protein 61 |
| NR | XP_007145057.1 | 1.94E-180 | hypothetical protein PHAVU_007G206200g [Phaseolus vulgaris] |
| Swissprot | tr|Q8LPH6|MYB86_ARATH | 2.00E-86 | Transcription factor MYB86 |
| trEMBL | tr|V7BKF7|V7BKF7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW17051.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00034 | 60564 | 62183 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | MYB |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000034s00002904.1 | PF00249.26 | Myb_DNA-binding | 14 | 61 | 6.30E-16 |
| Glyur000034s00002904.1 | PF00249.26 | Myb_DNA-binding | 67 | 110 | 9.30E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.000 |
| SRR1783600 | control | 0.935 |
| SRR1783602 | moderate drought stress | 0.527 |
| SRR1811619 | moderate drought stress | 0.624 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.054 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.947 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.162 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.082 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.324 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.325 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.347 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 14.755 |
| SRR2868004 | Drought Stress(Tissue:root) | 14.906 |
| SRR2967015 | Control (Tissue:root) | 14.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 0.000 |
| SRR9715740 | Leave | 0.000 |
| SRR9715741 | Leave | 0.147 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.380 |
| SRR9715743 | Root | 1.223 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.010 |
| SRR8749029 | MeJA induced 9h | 0.085 |
| SRR8749030 | Uninduced | 0.048 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 3.932 |
| SRR8400027 | Control-Root | 5.749 |