Gene detail information of Glyur000034s00002928.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G56720.30Protein kinase superfamily protein
NRXP_007145035.10hypothetical protein PHAVU_007G204300g [Phaseolus vulgaris]
COGYP_007201433.15.00E-28protein kinase family protein [Singulisphaera acidiphila DSM 18658]
Swissprottr|Q8LEB6|Y5185_ARATH0Probable receptor-like protein kinase At5g18500
trEMBLtr|V7BGL0|V7BGL0_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17029.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00034215946221405+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.6.3


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000034s00002928.1PF00069.20Pkinase1904561.30E-47


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.552
SRR1783600control21.606
SRR1783602moderate drought stress18.166
SRR1811619moderate drought stress17.939

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain28.461
DRR006520Root Summer glycyrrhizin high producing strain28.210
DRR006521Root Winter glycyrrhizin high producing strain3.749
DRR006522Root Winter glycyrrhizin high producing strain3.792
DRR006523Root Summer glycyrrhizin low producing strain15.171
DRR006524Root Summer glycyrrhizin low producing strain15.208
DRR006525Leaf Summer glycyrrhizin high producing strain17.790
DRR006526Leaf Summer glycyrrhizin high producing strain17.590

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)39.928
SRR2868004Drought Stress(Tissue:root)24.343
SRR2967015Control (Tissue:root)28.921

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave20.365
SRR9715740Leave16.183
SRR9715741Leave15.490
SRR9715739Root5.156
SRR9715742Root11.789
SRR9715743Root11.223

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h15.782
SRR8749028MeJA induced 9h10.971
SRR8749029MeJA induced 9h9.535
SRR8749030Uninduced1.614
SRR8749031Uninduced0.898
SRR8749032Uninduced1.679

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root35.155
SRR8400027Control-Root40.935

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved