Gene detail information of Glyur000034s00002931.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G26751.10shaggy-related kinase 11
NRXP_004495628.10PREDICTED: glycogen synthase kinase-3 homolog MsK-1-like isoform X4 [Cicer arietinum]
COGYP_008149401.19.00E-25hypothetical protein SCE1572_14835 [Sorangium cellulosum So0157-2]
Swissprottr|P51137|MSK1_MEDSA0Glycogen synthase kinase-3 homolog MsK-1
trEMBLtr|V7BHM7|V7BHM7_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW17025.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00034230226235059+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:4.5.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000034s00002931.1PF00069.20Pkinase773581.10E-62


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control160.564
SRR1783600control162.754
SRR1783602moderate drought stress177.306
SRR1811619moderate drought stress177.449

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain145.752
DRR006520Root Summer glycyrrhizin high producing strain135.939
DRR006521Root Winter glycyrrhizin high producing strain157.494
DRR006522Root Winter glycyrrhizin high producing strain159.018
DRR006523Root Summer glycyrrhizin low producing strain214.330
DRR006524Root Summer glycyrrhizin low producing strain223.586
DRR006525Leaf Summer glycyrrhizin high producing strain126.409
DRR006526Leaf Summer glycyrrhizin high producing strain125.217

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)201.980
SRR2868004Drought Stress(Tissue:root)217.449
SRR2967015Control (Tissue:root)192.217

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave151.959
SRR9715740Leave182.568
SRR9715741Leave211.213
SRR9715739Root73.939
SRR9715742Root122.263
SRR9715743Root116.516

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h178.844
SRR8749028MeJA induced 9h155.003
SRR8749029MeJA induced 9h167.435
SRR8749030Uninduced187.983
SRR8749031Uninduced211.422
SRR8749032Uninduced181.697

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root173.072
SRR8400027Control-Root152.194

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved