Gene detail information of Glyur000034s00002939.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT3G22460.12.00E-23O-acetylserine (thiol) lyase (OAS-TL) isoform A2
NRXP_004496722.11.05E-31PREDICTED: cysteine synthase-like [Cicer arietinum]
COGYP_003727506.17.00E-21cysteine synthase A [Methanohalobium evestigatum Z-7303]
Swissprottr|Q43317|CYSK_CITLA7.00E-30Cysteine synthase
trEMBLtr|V7BCG5|V7BCG5_PHAVU3.00E-31Cysteine synthase {ECO:0000256|RuleBase:RU003985}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00034253939257206-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01738cysK EC:2.5.1.47 Carbon metabolism map01200
Biosynthesis of amino acidsmap01230
Sulfur metabolismmap00920
Cysteine and methionine metabolismmap00270


Gene Ontology

Not hits found.


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000034s00002939.2PF00291.20PALP2851.10E-07


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control2.157
SRR1783600control2.258
SRR1783602moderate drought stress3.474
SRR1811619moderate drought stress3.485

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain4.247
DRR006520Root Summer glycyrrhizin high producing strain4.144
DRR006521Root Winter glycyrrhizin high producing strain5.079
DRR006522Root Winter glycyrrhizin high producing strain5.289
DRR006523Root Summer glycyrrhizin low producing strain2.331
DRR006524Root Summer glycyrrhizin low producing strain2.248
DRR006525Leaf Summer glycyrrhizin high producing strain3.818
DRR006526Leaf Summer glycyrrhizin high producing strain3.978

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)6.791
SRR2868004Drought Stress(Tissue:root)6.876
SRR2967015Control (Tissue:root)8.529

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.260
SRR9715740Leave4.505
SRR9715741Leave6.701
SRR9715739Root0.826
SRR9715742Root2.949
SRR9715743Root1.493

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.123
SRR8749028MeJA induced 9h3.786
SRR8749029MeJA induced 9h0.794
SRR8749030Uninduced10.251
SRR8749031Uninduced4.380
SRR8749032Uninduced5.086

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root21.659
SRR8400027Control-Root16.090

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved