Gene detail information of Glyur000034s00002977.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G02080.18.00E-92secretion-associated RAS super family 2
NRXP_004495668.16.69E-136PREDICTED: GTP-binding protein SAR1A-like [Cicer arietinum]
COGYP_001737337.19.00E-20small GTP-binding protein [Candidatus Korarchaeum cryptofilum OPF8]
Swissprottr|O04834|SAR1A_ARATH6.00E-134GTP-binding protein SAR1A
trEMBLtr|I1LB56|I1LB56_SOYBN3.00E-136Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G28910.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00034453982456922+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K07953SAR1 EC:3.6.5.- Protein processing in endoplasmic reticulum map04141
Legionellosismap05134


Gene Ontology

biological_process

GO:0006886  intracellular protein transport

GO:0007264  small GTPase mediated signal transduction


cellular_component

GO:0005622  intracellular


molecular_function

GO:0005525  GTP binding

"

Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000034s00002977.1PF00025.16Arf81922.80E-65


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control18.106
SRR1783600control18.328
SRR1783602moderate drought stress12.773
SRR1811619moderate drought stress12.877

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain31.389
DRR006520Root Summer glycyrrhizin high producing strain30.636
DRR006521Root Winter glycyrrhizin high producing strain12.125
DRR006522Root Winter glycyrrhizin high producing strain12.308
DRR006523Root Summer glycyrrhizin low producing strain25.603
DRR006524Root Summer glycyrrhizin low producing strain25.355
DRR006525Leaf Summer glycyrrhizin high producing strain3.931
DRR006526Leaf Summer glycyrrhizin high producing strain4.050

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.478
SRR2868004Drought Stress(Tissue:root)17.716
SRR2967015Control (Tissue:root)15.386

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.897
SRR9715740Leave12.449
SRR9715741Leave1.890
SRR9715739Root17.507
SRR9715742Root10.688
SRR9715743Root13.403

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h40.543
SRR8749028MeJA induced 9h13.482
SRR8749029MeJA induced 9h22.118
SRR8749030Uninduced6.491
SRR8749031Uninduced2.607
SRR8749032Uninduced6.302

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root31.176
SRR8400027Control-Root34.601

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved