Gene detail information of Glyur000035s00004956.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G62305.11.00E-128Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
NRXP_004486183.10PREDICTED: uncharacterized protein LOC101510083 [Cicer arietinum]
trEMBLtr|A0A072V4K7|A0A072V4K7_MEDTR0Core-2/I-branching enzyme {ECO:0000313|EMBL:KEH36919.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000351460119252-


Gene family

Gene familysubfamily
Carbohydrate-Active enzymes FamilyGTnc


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

cellular_component

GO:0016020  membrane


molecular_function

GO:0008375  acetylglucosaminyltransferase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000035s00004956.2PF02485.16Branch653201.00E-80


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.424
SRR1783600control16.514
SRR1783602moderate drought stress19.432
SRR1811619moderate drought stress19.284

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain18.902
DRR006520Root Summer glycyrrhizin high producing strain18.045
DRR006521Root Winter glycyrrhizin high producing strain90.621
DRR006522Root Winter glycyrrhizin high producing strain88.477
DRR006523Root Summer glycyrrhizin low producing strain24.559
DRR006524Root Summer glycyrrhizin low producing strain23.861
DRR006525Leaf Summer glycyrrhizin high producing strain8.085
DRR006526Leaf Summer glycyrrhizin high producing strain8.180

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)25.377
SRR2868004Drought Stress(Tissue:root)31.080
SRR2967015Control (Tissue:root)28.179

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave22.571
SRR9715740Leave22.645
SRR9715741Leave19.338
SRR9715739Root6.847
SRR9715742Root13.068
SRR9715743Root12.131

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h20.853
SRR8749028MeJA induced 9h19.027
SRR8749029MeJA induced 9h15.836
SRR8749030Uninduced16.940
SRR8749031Uninduced7.331
SRR8749032Uninduced8.830

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root43.486
SRR8400027Control-Root28.260

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved