Gene detail information of Glyur000035s00004959.2


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G04320.10malonyl-CoA decarboxylase family protein
NRXP_004486185.10PREDICTED: malonyl-CoA decarboxylase, mitochondrial-like isoform X1 [Cicer arietinum]
COGNP_435327.27.00E-67hypothetical protein SMa0151 [Sinorhizobium meliloti 1021]
trEMBLtr|I1MFK5|I1MFK5_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G11810.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000352859837413-


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01578MLYCD EC:4.1.1.9 Propanoate metabolism map00640
beta-Alanine metabolismmap00410
AMPK signaling pathwaymap04152
Peroxisomemap04146


Gene Ontology

biological_process

GO:0006633  fatty acid biosynthetic process


molecular_function

GO:0050080  malonyl-CoA decarboxylase activity


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000035s00004959.2PF05292.6MCD1424902.60E-115


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control11.491
SRR1783600control11.607
SRR1783602moderate drought stress11.135
SRR1811619moderate drought stress11.097

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain13.150
DRR006520Root Summer glycyrrhizin high producing strain12.557
DRR006521Root Winter glycyrrhizin high producing strain11.105
DRR006522Root Winter glycyrrhizin high producing strain10.873
DRR006523Root Summer glycyrrhizin low producing strain11.290
DRR006524Root Summer glycyrrhizin low producing strain11.000
DRR006525Leaf Summer glycyrrhizin high producing strain9.256
DRR006526Leaf Summer glycyrrhizin high producing strain8.986

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)19.853
SRR2868004Drought Stress(Tissue:root)24.290
SRR2967015Control (Tissue:root)22.257

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave6.319
SRR9715740Leave5.585
SRR9715741Leave7.674
SRR9715739Root1.435
SRR9715742Root6.778
SRR9715743Root4.488

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h6.543
SRR8749028MeJA induced 9h9.477
SRR8749029MeJA induced 9h5.944
SRR8749030Uninduced5.785
SRR8749031Uninduced5.298
SRR8749032Uninduced3.794

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root19.555
SRR8400027Control-Root16.730

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved