Gene detail information of Glyur000035s00004960.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G22130.10STRUBBELIG-receptor family 8
NRXP_006597598.10PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 8-like [Glycine max]
COGYP_005517714.12.00E-22serine/threonine protein kinase with PASTA sensor(s) [Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1]
Swissprottr|Q6R2J8|SRF8_ARATH0Protein STRUBBELIG-RECEPTOR FAMILY 8 (Precursor)
trEMBLtr|I1MFK6|I1MFK6_SOYBN0Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G11820.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold000354095945972+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:1.1.1


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005515  protein binding

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000035s00004960.1PF08263.7LRRNT_236755.30E-07
Glyur000035s00004960.1PF00560.28LRR_11031200.43
Glyur000035s00004960.1PF13855.1LRR_81241841.40E-07
Glyur000035s00004960.1PF00069.20Pkinase4186852.20E-45


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control36.877
SRR1783600control35.698
SRR1783602moderate drought stress20.245
SRR1811619moderate drought stress20.660

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain17.808
DRR006520Root Summer glycyrrhizin high producing strain16.854
DRR006521Root Winter glycyrrhizin high producing strain1.981
DRR006522Root Winter glycyrrhizin high producing strain1.927
DRR006523Root Summer glycyrrhizin low producing strain12.510
DRR006524Root Summer glycyrrhizin low producing strain12.376
DRR006525Leaf Summer glycyrrhizin high producing strain2.464
DRR006526Leaf Summer glycyrrhizin high producing strain2.565

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)28.055
SRR2868004Drought Stress(Tissue:root)17.740
SRR2967015Control (Tissue:root)18.833

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.549
SRR9715740Leave0.961
SRR9715741Leave1.111
SRR9715739Root9.312
SRR9715742Root21.858
SRR9715743Root19.312

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h13.239
SRR8749028MeJA induced 9h6.987
SRR8749029MeJA induced 9h4.397
SRR8749030Uninduced1.661
SRR8749031Uninduced0.496
SRR8749032Uninduced1.130

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root45.230
SRR8400027Control-Root52.109

© 2021 Resource Institute for Chinese & Ethnic Materia Medica ,Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved