Gene detail information of Glyur000035s00004988.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT1G62400.12.00E-176Protein kinase superfamily protein
NRXP_007154003.10hypothetical protein PHAVU_003G082800g [Phaseolus vulgaris]
COGYP_001958461.19.00E-38hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprottr|Q2MHE4|HT1_ARATH0Serine/threonine-protein kinase HT1
trEMBLtr|V7C735|V7C735_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW25997.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00035257078262075+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:2.1.4


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0004674  protein serine/threonine kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000035s00004988.1PF07714.12Pkinase_Tyr813332.20E-66


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.917
SRR1783600control1.996
SRR1783602moderate drought stress3.286
SRR1811619moderate drought stress3.309

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain7.393
DRR006520Root Summer glycyrrhizin high producing strain7.574
DRR006521Root Winter glycyrrhizin high producing strain4.484
DRR006522Root Winter glycyrrhizin high producing strain4.471
DRR006523Root Summer glycyrrhizin low producing strain14.499
DRR006524Root Summer glycyrrhizin low producing strain15.184
DRR006525Leaf Summer glycyrrhizin high producing strain2.373
DRR006526Leaf Summer glycyrrhizin high producing strain2.281

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)3.931
SRR2868004Drought Stress(Tissue:root)6.553
SRR2967015Control (Tissue:root)7.027

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave2.601
SRR9715740Leave3.222
SRR9715741Leave3.055
SRR9715739Root1.200
SRR9715742Root3.711
SRR9715743Root3.232

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h1.533
SRR8749028MeJA induced 9h0.198
SRR8749029MeJA induced 9h0.320
SRR8749030Uninduced0.000
SRR8749031Uninduced0.036
SRR8749032Uninduced0.027

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root4.027
SRR8400027Control-Root3.537

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved