Gene detail information of Glyur000035s00004996.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G22340.3 | 5.00E-175 | cytidinediphosphate diacylglycerol synthase 2 |
| NR | XP_007144046.1 | 0 | hypothetical protein PHAVU_007G124400g [Phaseolus vulgaris] |
| COG | NP_924342.1 | 3.00E-12 | phosphatidate cytidylyltransferase [Gloeobacter violaceus PCC 7421] |
| Swissprot | tr|O04940|CDS1_SOLTU | 0 | Phosphatidate cytidylyltransferase |
| trEMBL | tr|V7BEP1|V7BEP1_PHAVU | 0 | Phosphatidate cytidylyltransferase {ECO:0000256|RuleBase:RU003938} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information(JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00035 | 303759 | 311023 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00981 | E2.7.7.41, CDS1, CDS2, cdsA | EC:2.7.7.41 | Glycerophospholipid metabolism | map00564 |
| Phosphatidylinositol signaling system | map04070 |
Gene OntologyNot hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000035s00004996.1 | PF01148.15 | CTP_transf_1 | 51 | 338 | 5.60E-62 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.771 |
| SRR1783600 | control | 17.395 |
| SRR1783602 | moderate drought stress | 15.348 |
| SRR1811619 | moderate drought stress | 15.669 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.233 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.043 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 51.266 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 50.526 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 24.806 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 24.894 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 48.595 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 49.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress(Tissue:root) | 49.103 |
| SRR2868004 | Drought Stress(Tissue:root) | 44.896 |
| SRR2967015 | Control (Tissue:root) | 48.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leave | 60.032 |
| SRR9715740 | Leave | 79.402 |
| SRR9715741 | Leave | 65.758 |
| SRR9715739 | Root | 12.953 |
| SRR9715742 | Root | 21.633 |
| SRR9715743 | Root | 20.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.066 |
| SRR8749028 | MeJA induced 9h | 20.751 |
| SRR8749029 | MeJA induced 9h | 16.372 |
| SRR8749030 | Uninduced | 10.101 |
| SRR8749031 | Uninduced | 3.775 |
| SRR8749032 | Uninduced | 7.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment-Root | 43.990 |
| SRR8400027 | Control-Root | 43.802 |