Gene detail information of Glyur000036s00004638.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G11070.15.00E-55WRKY family transcription factor
NRABX10954.10WRKY family transcription factor [Cicer arietinum]
Swissprottr|Q8H0Y8|WRK41_ARATH6.00E-65Probable WRKY transcription factor 41
trEMBLtr|B4XKD2|B4XKD2_CICAR0WRKY family transcription factor {ECO:0000313|EMBL:ABX10954.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00036221553224611-


Gene family

Gene familysubfamily
Transcription Factors FamilyWRKY


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
----------


Gene Ontology

biological_process

GO:0006355  regulation of transcription, DNA-templated


molecular_function

GO:0003700  transcription factor activity, sequence-specific DNA binding

GO:0043565  sequence-specific DNA binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000036s00004638.1PF03106.10WRKY1261862.30E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control3.540
SRR1783600control3.334
SRR1783602moderate drought stress2.239
SRR1811619moderate drought stress2.251

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain113.002
DRR006520Root Summer glycyrrhizin high producing strain103.812
DRR006521Root Winter glycyrrhizin high producing strain1.642
DRR006522Root Winter glycyrrhizin high producing strain1.421
DRR006523Root Summer glycyrrhizin low producing strain200.935
DRR006524Root Summer glycyrrhizin low producing strain198.831
DRR006525Leaf Summer glycyrrhizin high producing strain59.974
DRR006526Leaf Summer glycyrrhizin high producing strain64.306

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)4.935
SRR2868004Drought Stress(Tissue:root)27.423
SRR2967015Control (Tissue:root)33.679

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave225.615
SRR9715740Leave163.640
SRR9715741Leave188.960
SRR9715739Root14.009
SRR9715742Root75.807
SRR9715743Root62.899

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h33.149
SRR8749028MeJA induced 9h13.113
SRR8749029MeJA induced 9h15.130
SRR8749030Uninduced125.715
SRR8749031Uninduced22.385
SRR8749032Uninduced33.750

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root7.655
SRR8400027Control-Root35.948

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved