Gene detail information of Glyur000036s00004655.1


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G10960.13.00E-165UDP-D-glucose/UDP-D-galactose 4-epimerase 5
NRO65781.10RecName: Full=UDP-glucose 4-epimerase GEPI48; AltName: Full=Galactowaldenase; AltName: Full=UDP-galactose 4-epimerase [Cyamopsis tetragonoloba]
COGYP_006416278.12.00E-143UDP-galactose 4-epimerase [Thiocystis violascens DSM 198]
Swissprottr|O65781|GALE2_CYATE0UDP-glucose 4-epimerase GEPI48
trEMBLtr|A0A072U5W7|A0A072U5W7_MEDTR0UDP-D-glucose/UDP-D-galactose 4-epimerase {ECO:0000313|EMBL:KEH21235.1}

Sequence

Transcript Sequence
Protein Sequence


Location information(JBrowse)

ScaffoldStartEndStrand
Scaffold00036334809338571+


Gene family

Gene familysubfamily
----


KEGG pathway

KO Enzyme Enzyme ID pathway mapID
K01784galE, GALE EC:5.1.3.2 Galactose metabolism map00052
Amino sugar and nucleotide sugar metabolismmap00520


Gene Ontology

biological_process

GO:0006012  galactose metabolic process


molecular_function

GO:0003824  catalytic activity

GO:0003978  UDP-glucose 4-epimerase activity

GO:0050662  coenzyme binding


Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000036s00004655.1PF01370.16Epimerase62763.10E-49
Glyur000036s00004655.1PF13950.1Epimerase_Csub2893503.90E-28


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control1.927
SRR1783600control1.928
SRR1783602moderate drought stress0.813
SRR1811619moderate drought stress0.750

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain25.731
DRR006520Root Summer glycyrrhizin high producing strain25.610
DRR006521Root Winter glycyrrhizin high producing strain2.031
DRR006522Root Winter glycyrrhizin high producing strain1.819
DRR006523Root Summer glycyrrhizin low producing strain30.539
DRR006524Root Summer glycyrrhizin low producing strain29.830
DRR006525Leaf Summer glycyrrhizin high producing strain6.723
DRR006526Leaf Summer glycyrrhizin high producing strain6.809

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress(Tissue:root)11.440
SRR2868004Drought Stress(Tissue:root)13.245
SRR2967015Control (Tissue:root)8.228

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leave13.031
SRR9715740Leave9.588
SRR9715741Leave16.603
SRR9715739Root6.988
SRR9715742Root6.973
SRR9715743Root6.296

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h8.122
SRR8749028MeJA induced 9h12.498
SRR8749029MeJA induced 9h7.116
SRR8749030Uninduced7.019
SRR8749031Uninduced7.973
SRR8749032Uninduced5.421

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment-Root6.468
SRR8400027Control-Root9.964

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved